RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.9
TRIM49-202ENST00000532501 ZNF157P51786 506 aaPredicted RBP9.46□□□□□ -0.9
TRIM49-202ENST00000532501 SPP2Q13103 211 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 RAB3GAP1Q15042 981 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 ZYXQ15942 572 aaKnown RBP9.46□□□□□ -0.9
TRIM49-202ENST00000532501 MFSD6Q6ZSS7 791 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 ERO1BQ86YB8 467 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 LRRC47Q8N1G4 583 aaKnown RBP9.46□□□□□ -0.9
TRIM49-202ENST00000532501 BRI3BPQ8WY22 251 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 HOOK2Q96ED9 719 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 CAPNS2Q96L46 248 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 TRIM34Q9BYJ4 488 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 ZSWIM5Q9P217 1185 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 AFG3L2Q9Y4W6 797 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 CSADQ9Y600 493 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 ZHX2Q9Y6X8 837 aa9.46□□□□□ -0.9
TRIM49-202ENST00000532501 PHIPQ8WWQ0 1821 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 EEF2P13639 858 aaKnown RBP9.45□□□□□ -0.9
TRIM49-202ENST00000532501 NOVP48745 357 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 ICA1Q05084 483 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 PDE4BQ07343 736 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 MTMR2Q13614 643 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 SEC23AQ15436 765 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 TMEM179Q6ZVK1 233 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
TRIM49-202ENST00000532501 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 PTPN18Q99952 460 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 UPF3BQ9BZI7 483 aaKnown RBP9.45□□□□□ -0.9
TRIM49-202ENST00000532501 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 MTMR4Q9NYA4 1195 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 KCNH4Q9UQ05 1017 aa9.45□□□□□ -0.9
TRIM49-202ENST00000532501 TSPY2A6NKD2 308 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 USP17L5A8MUK1 530 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 IGF2BP3O00425 579 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM49-202ENST00000532501 PEX10O60683 326 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 ASNSP08243 561 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 ATP2B2Q01814 1243 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 PPIL2Q13356 520 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 DEFB115Q30KQ5 88 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 TREML2Q5T2D2 321 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 GPAT2Q6NUI2 795 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
TRIM49-202ENST00000532501 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
TRIM49-202ENST00000532501 CCDC17Q96LX7 622 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 JAKMIP1Q96N16 626 aaKnown RBP9.44□□□□□ -0.9
TRIM49-202ENST00000532501 NUP88Q99567 741 aaPredicted RBP9.44□□□□□ -0.9
TRIM49-202ENST00000532501 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 PICK1Q9NRD5 415 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 TNKSO95271 1327 aa9.44□□□□□ -0.9
TRIM49-202ENST00000532501 ATAD5Q96QE3 1844 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 A0A0G2JLL6 359 aaPredicted RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 EPB41L2O43491 1005 aaKnown RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 PRC1O43663 620 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 DTNBO60941 627 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 TSPY3P0CV98 308 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 TSPY8P0CW00 308 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 HMGCS2P54868 508 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 EXOSC10Q01780 885 aaKnown RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 PRRT2Q7Z6L0 340 aaPredicted RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 SPICE1Q8N0Z3 855 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 FAM43AQ8N2R8 423 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 ZNF280CQ8ND82 737 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 ESR2Q92731 530 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 HHIPL1Q96JK4 782 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 R3HDMLQ9H3Y0 253 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 THSD7BQ9C0I4 1608 aa9.43□□□□□ -0.9
TRIM49-202ENST00000532501 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
TRIM49-202ENST00000532501 CCL15-CCL14A0A0B4J2E2 113 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 BTBD19C9JJ37 291 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 SH2B2O14492 632 aaPredicted RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 NDUFB10O96000 172 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 SLC3A2P08195 630 aaKnown RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 BACE1P56817 501 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 PPATQ06203 517 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 CCL15Q16663 113 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 NCOA7Q8NI08 942 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 KCTD12Q96CX2 325 aaKnown RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 TBC1D32Q96NH3 1257 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 NEK1Q96PY6 1258 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 TMEM47Q9BQJ4 181 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 MYL10Q9BUA6 226 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 UPF2Q9HAU5 1272 aaKnown RBP9.42□□□□□ -0.9
TRIM49-202ENST00000532501 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 CABP5Q9NP86 173 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
TRIM49-202ENST00000532501 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms