RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CDC42BPBQ9Y5S2 1711 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 PTGS1P23219 599 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 PPP1R2P41236 205 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
PTPRK-221ENST00000532331 MICALCLQ6ZW33 695 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 RSPH3Q86UC2 560 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CTAGE15A4D2H0 777 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CCDC175P0C221 793 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CTAGE8P0CG41 777 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 TMOD1P28289 359 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CHRNA5P30532 468 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 DYNLL1P63167 89 aaKnown RBP12.63□□□□□ -0.39
PTPRK-221ENST00000532331 UBXN1Q04323 297 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CTAGE6Q86UF2 777 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 TPH2Q8IWU9 490 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 CTAGE4Q8IX94 777 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 DEPTORQ8TB45 409 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 ELP1O95163 1332 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
PTPRK-221ENST00000532331 POLR3GO15318 223 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 TRAF5O00463 557 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 CALUO43852 315 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 STX17P56962 302 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 GPBP1L1Q9HC44 474 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 DIP2BQ9P265 1576 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 TUBB4AP04350 444 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 CRKP46108 304 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 KIF5AQ12840 1032 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 MYCT1Q8N699 235 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 RASAL2Q9UJF2 1139 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 AMNQ9BXJ7 453 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 ZNF341Q9BYN7 854 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 NACA2Q9H009 215 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 KRT86O43790 486 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 DDAH1O94760 285 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
PTPRK-221ENST00000532331 ARID5AQ03989 594 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 DIXDC1Q155Q3 683 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 DNAI1Q9UI46 699 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
PTPRK-221ENST00000532331 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 POLA2Q14181 598 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 PRR16Q569H4 304 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 HSF2BPO75031 334 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 SASH1O94885 1247 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 EEF2P13639 858 aaKnown RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 ASPRV1Q53RT3 343 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 LMTK2Q8IWU2 1503 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 STX10O60499 249 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 KRT5P13647 590 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 HOXD10P28358 340 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 CBX1P83916 185 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
PTPRK-221ENST00000532331 ZNF830Q96NB3 372 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 DBNLQ9UJU6 430 aaKnown RBP12.61□□□□□ -0.39
PTPRK-221ENST00000532331 H7C1W4 665 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 BMP3P12645 472 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 PSMD1Q99460 953 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FMNL3Q8IVF7 1028 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 RNF34Q969K3 372 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FGAP02671 866 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 ASNSP08243 561 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 IGBP1P78318 339 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 MECOMQ03112 1051 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 NOLC1Q14978 699 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■■□□ 16.8
PTPRK-221ENST00000532331 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 PLA2G4DQ86XP0 818 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-221ENST00000532331 GJC1P36383 396 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 KRT40Q6A162 431 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms