RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 TTC39AQ5SRH9 613 aa10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 NAA16Q6N069 864 aaPredicted RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 METTL16Q86W50 562 aaKnown RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 NOL10Q9BSC4 688 aaKnown RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 DHX36Q9H2U1 1008 aaKnown RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 AGTPBP1Q9UPW5 1226 aa10.54□□□□□ -0.72
PTP4A2-213ENST00000532001 S1PR4O95977 384 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 CYP2E1P05181 493 aaPredicted RBP10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 SLURP2P0DP57 97 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 CYP2C8P10632 490 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 EN2P19622 333 aaPredicted RBP10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 FCGRTP55899 365 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 CEP85Q6P2H3 762 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 CERS3Q8IU89 383 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 SH3RF3Q8TEJ3 882 aaPredicted RBP10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 PI4KBQ9UBF8 816 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 MYPNQ86TC9 1320 aa10.53□□□□□ -0.72
PTP4A2-213ENST00000532001 CLCN1P35523 988 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 CAP2P40123 477 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 SPSB2Q99619 263 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 SNRKQ9NRH2 765 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 PPP4R2Q9NY27 417 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 FLT1P17948 1338 aa10.52□□□□□ -0.73
PTP4A2-213ENST00000532001 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 TRIM75PA6NK02 468 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 FAM196BA6NMK8 535 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 GRK4P32298 578 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 ZAP70P43403 619 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 PRKCZQ05513 592 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 PABPC4Q13310 644 aaKnown RBP eCLIP10.51□□□□□ -0.733e-33■□□□□ 8.8
PTP4A2-213ENST00000532001 RRP1BQ14684 758 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 FAM110CQ1W6H9 321 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 SLC4A8Q2Y0W8 1093 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 SH3D19Q5HYK7 790 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 ADGRA1Q86SQ6 560 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 RAET1EQ8TD07 263 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 THAP11Q96EK4 314 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 WDR18Q9BV38 432 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 SLC6A16Q9GZN6 736 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 PIH1D3Q9NQM4 214 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 TLR7Q9NYK1 1049 aaKnown RBP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
PTP4A2-213ENST00000532001 ASNSP08243 561 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 CAPN2P17655 700 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 GCLCP48506 637 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 IRF5Q13568 498 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 HSP90AB4PQ58FF6 505 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 TREML2Q5T2D2 321 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 FOXP4Q8IVH2 680 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 DNAJC18Q9H819 358 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 AS3MTQ9HBK9 375 aa10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
PTP4A2-213ENST00000532001 PLXNB2O15031 1838 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 MYH7P12883 1935 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 GJB1P08034 283 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 UBXN2AP68543 259 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 SPP2Q13103 211 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 MAPKAPK5Q8IW41 473 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 TGFBRAP1Q8WUH2 860 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 SHISA4Q96DD7 197 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 EXOC6BQ9Y2D4 811 aa10.49□□□□□ -0.73
PTP4A2-213ENST00000532001 TNPO2O14787 897 aaKnown RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 HLA-DOAP06340 250 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 CYP7A1P22680 504 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 HOXA7P31268 230 aaPredicted RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 GJA8P48165 433 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 HMGCS2P54868 508 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 BACE1P56817 501 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 HDAC1Q13547 482 aaPredicted RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 LAPTM4AQ15012 233 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 MTFR1Q15390 333 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 AACSQ86V21 672 aa10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 RPAP2Q8IXW5 612 aaPredicted RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 EMID1Q96A84 441 aaPredicted RBP10.48□□□□□ -0.73
PTP4A2-213ENST00000532001 EHD4Q9H223 541 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms