RNA–Protein interactions for RNA: ENST00000531899.5

CDHR5-208, Transcript of cadherin related family member 5, humanhuman

TSL 1 (best)

Gene CDHR5, Length 1,311 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR5-208ENST00000531899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.38■■□□□ 1.33
CDHR5-208ENST00000531899 CTCFLQ8NI51 663 aaPredicted RBP23.38■■□□□ 1.33
CDHR5-208ENST00000531899 FOXD4L1Q9NU39 408 aa23.38■■□□□ 1.33
CDHR5-208ENST00000531899 CTDNEP1O95476 244 aa23.37■■□□□ 1.33
CDHR5-208ENST00000531899 IREB2P48200 963 aaKnown RBP23.37■■□□□ 1.33
CDHR5-208ENST00000531899 GNAQP50148 359 aa23.37■■□□□ 1.33
CDHR5-208ENST00000531899 MAP3K11Q16584 847 aa23.37■■□□□ 1.33
CDHR5-208ENST00000531899 CCDC144CPQ8IYA2 1237 aa23.37■■□□□ 1.33
CDHR5-208ENST00000531899 NSUN7Q8NE18 718 aaKnown RBP23.37■■□□□ 1.33
CDHR5-208ENST00000531899 SMARCC2Q8TAQ2 1214 aa23.37■■□□□ 1.33
CDHR5-208ENST00000531899 USP17L5A8MUK1 530 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 SNHG28P0DPA3 235 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 HMGN5P82970 282 aaKnown RBP23.36■■□□□ 1.33
CDHR5-208ENST00000531899 NTRK3Q16288 839 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 GMCL1P1Q8NEA9 526 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 LZTS2Q9BRK4 669 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 SH2D4AQ9H788 454 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 PICK1Q9NRD5 415 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 TMX2Q9Y320 296 aa23.36■■□□□ 1.33
CDHR5-208ENST00000531899 PALM3A6NDB9 673 aaPredicted RBP23.35■■□□□ 1.33
CDHR5-208ENST00000531899 IFNAR1P17181 557 aa23.35■■□□□ 1.33
CDHR5-208ENST00000531899 DDIT3P35638 169 aa23.35■■□□□ 1.33
CDHR5-208ENST00000531899 CHADLQ6NUI6 762 aa23.35■■□□□ 1.33
CDHR5-208ENST00000531899 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
CDHR5-208ENST00000531899 ZKSCAN4Q969J2 545 aaPredicted RBP23.35■■□□□ 1.33
CDHR5-208ENST00000531899 A0A1W2PRG0 241 aa23.34■■□□□ 1.33
CDHR5-208ENST00000531899 PARP1P09874 1014 aaKnown RBP23.34■■□□□ 1.33
CDHR5-208ENST00000531899 ARMC9Q7Z3E5 817 aa23.34■■□□□ 1.33
CDHR5-208ENST00000531899 DCAF4Q8WV16 495 aa23.34■■□□□ 1.33
CDHR5-208ENST00000531899 WDR18Q9BV38 432 aa23.34■■□□□ 1.33
CDHR5-208ENST00000531899 MAD2L2Q9UI95 211 aa23.34■■□□□ 1.33
CDHR5-208ENST00000531899 UNCXA6NJT0 531 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 PDHBP11177 359 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 PTPRAP18433 802 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 SMARCA1P28370 1054 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 PRKG1Q13976 671 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 ASPRV1Q53RT3 343 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.33■■□□□ 1.33
CDHR5-208ENST00000531899 TMTC3Q6ZXV5 915 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 ACER1Q8TDN7 264 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 AS3MTQ9HBK9 375 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 GPBP1L1Q9HC44 474 aaPredicted RBP23.33■■□□□ 1.33
CDHR5-208ENST00000531899 FZD1Q9UP38 647 aa23.33■■□□□ 1.33
CDHR5-208ENST00000531899 MYH4Q9Y623 1939 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 PTPDC1A2A3K4 754 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 F5H6K3 240 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 JAK2O60674 1132 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 GJB2P29033 226 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 KLRC3Q07444 240 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 SLFN13Q68D06 897 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 GMCL1Q96IK5 515 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 GOPCQ9HD26 462 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 CIZ1Q9ULV3 898 aaPredicted RBP23.33■■□□□ 1.32
CDHR5-208ENST00000531899 KIF3AQ9Y496 699 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 CSADQ9Y600 493 aa23.33■■□□□ 1.32
CDHR5-208ENST00000531899 TRAF5O00463 557 aa23.32■■□□□ 1.32
CDHR5-208ENST00000531899 PDIA4P13667 645 aaKnown RBP23.32■■□□□ 1.32
CDHR5-208ENST00000531899 FKBP1BP68106 108 aa23.32■■□□□ 1.32
CDHR5-208ENST00000531899 FUT2Q10981 343 aa23.32■■□□□ 1.32
CDHR5-208ENST00000531899 GPATCH4Q5T3I0 446 aaKnown RBP23.32■■□□□ 1.32
CDHR5-208ENST00000531899 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
CDHR5-208ENST00000531899 KIAA1683Q9H0B3 1180 aa23.32■■□□□ 1.32
CDHR5-208ENST00000531899 ATAD5Q96QE3 1844 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 DOCK1Q14185 1865 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 STK36Q9NRP7 1315 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 FMNL1O95466 1100 aaPredicted RBP23.31■■□□□ 1.32
CDHR5-208ENST00000531899 ITGBL1O95965 494 aaPredicted RBP23.31■■□□□ 1.32
CDHR5-208ENST00000531899 ECE1P42892 770 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 SSRP1Q08945 709 aaKnown RBP23.31■■□□□ 1.32
CDHR5-208ENST00000531899 ZNF543Q08ER8 600 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 VGLL4Q14135 290 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 TTLL12Q14166 644 aaPredicted RBP23.31■■□□□ 1.32
CDHR5-208ENST00000531899 LDLRAD1Q5T700 205 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 USP17L2Q6R6M4 530 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 NBPF11Q86T75 865 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.31■■□□□ 1.32
CDHR5-208ENST00000531899 MTMR7Q9Y216 660 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 SNCAIPQ9Y6H5 919 aa23.31■■□□□ 1.32
CDHR5-208ENST00000531899 KLRF2D3W0D1 207 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 PLEKHA8P1O95397 391 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 NDUFB10O96000 172 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 FDPSP14324 419 aaKnown RBP23.3■■□□□ 1.32
CDHR5-208ENST00000531899 PDCP20941 246 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 STAG2Q8N3U4 1231 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 SRBD1Q8N5C6 995 aaKnown RBP23.3■■□□□ 1.32
CDHR5-208ENST00000531899 ZNF280CQ8ND82 737 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 DDX11Q96FC9 970 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 RNF26Q9BY78 433 aaPredicted RBP23.3■■□□□ 1.32
CDHR5-208ENST00000531899 VCPKMTQ9H867 229 aa23.3■■□□□ 1.32
CDHR5-208ENST00000531899 ORC3Q9UBD5 711 aaPredicted RBP23.3■■□□□ 1.32
CDHR5-208ENST00000531899 USP17L10C9JJH3 530 aa23.29■■□□□ 1.32
CDHR5-208ENST00000531899 PRPF3O43395 683 aaKnown RBP23.29■■□□□ 1.32
CDHR5-208ENST00000531899 SLC1A4P43007 532 aa23.29■■□□□ 1.32
CDHR5-208ENST00000531899 CCDC84Q86UT8 332 aaPredicted RBP23.29■■□□□ 1.32
CDHR5-208ENST00000531899 FAM184AQ8NB25 1140 aa23.29■■□□□ 1.32
CDHR5-208ENST00000531899 CHMP5Q9NZZ3 219 aa23.29■■□□□ 1.32
CDHR5-208ENST00000531899 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
CDHR5-208ENST00000531899 ZHX2Q9Y6X8 837 aa23.29■■□□□ 1.32
CDHR5-208ENST00000531899 USP14P54578 494 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms