RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 SNED1Q8TER0 1413 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 DDX60LQ5H9U9 1706 aaKnown RBP11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 KIF28PB7ZC32 967 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 NR1I2O75469 434 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 TTLL1O95922 423 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 GNA11P29992 359 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 NLRP5P59047 1200 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 PTPAQ15257 358 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 PKN1Q16512 942 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 GPATCH4Q5T3I0 446 aaKnown RBP11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 CDC42EP5Q6NZY7 148 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 SDF4Q9BRK5 362 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 CLIC4Q9Y696 253 aa11.1□□□□□ -0.63
NPIPA3-202ENST00000531598 BTBD18B2RXH4 712 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 LAD1O00515 517 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 PTPREP23469 700 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 CHRNA5P30532 468 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 TRAF1Q13077 416 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 SNW1Q13573 536 aaKnown RBP11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 RESP18Q5W5W9 173 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 AIFM3Q96NN9 605 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 MTFR1LQ9H019 292 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 DBNDD1Q9H9R9 158 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 MAD2L2Q9UI95 211 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 SRPRBQ9Y5M8 271 aaKnown RBP11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 MYH2Q9UKX2 1941 aa11.09□□□□□ -0.63
NPIPA3-202ENST00000531598 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 IGKV6D-41A0A0C4DH26 115 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 ESYT2A0FGR8 921 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 GOLGA6L6A8MZA4 724 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 MYO1BO43795 1136 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 SYKP43405 635 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 RBM5P52756 815 aaKnown RBP eCLIP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 TPM4P67936 248 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 PICALMQ13492 652 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 DHX8Q14562 1220 aaKnown RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 AXDND1Q5T1B0 1012 aaPredicted RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 ARL6IP4Q66PJ3 421 aaKnown RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 CEP57L1Q8IYX8 460 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 MTMR14Q8NCE2 650 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 KANSL2Q9H9L4 492 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 C6orf50Q9HD87 102 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 CCDC39Q9UFE4 941 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 PCDHA4Q9UN74 947 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 HPSEQ9Y251 543 aa11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
NPIPA3-202ENST00000531598 KLRF2D3W0D1 207 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 NMT2O60551 498 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 DTNBO60941 627 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 ZNF202O95125 648 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 VIL1P09327 827 aaKnown RBP11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 SNHG28P0DPA3 235 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 AOC3Q16853 763 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 CT47A1Q5JQC4 288 aaPredicted RBP11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 KIAA0825Q8IV33 1275 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 NIM1KQ8IY84 436 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 BLIDQ8IZY5 108 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 LARGE2Q8N3Y3 721 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 CEP95Q96GE4 821 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 NAP1L4Q99733 375 aaKnown RBP11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 BPIFA3Q9BQP9 254 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 CABP5Q9NP86 173 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 ZNRF3Q9ULT6 936 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 KCNJ14Q9UNX9 436 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 MYH15Q9Y2K3 1946 aa11.07□□□□□ -0.64
NPIPA3-202ENST00000531598 BAZ2AQ9UIF9 1905 aaKnown RBP11.06□□□□□ -0.64
NPIPA3-202ENST00000531598 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
NPIPA3-202ENST00000531598 C21orf2O43822 256 aa11.06□□□□□ -0.64
NPIPA3-202ENST00000531598 PFKFB1P16118 471 aa11.06□□□□□ -0.64
NPIPA3-202ENST00000531598 SCNN1DP51172 638 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms