RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
CASP4-210ENST00000531546 SLC6A17Q9H1V8 727 aa8.46□□□□□ -1.06
CASP4-210ENST00000531546 PCF11O94913 1555 aaKnown RBP8.46□□□□□ -1.06
CASP4-210ENST00000531546 USP17L7P0C7H9 530 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 CDH24Q86UP0 819 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 PDZD8Q8NEN9 1154 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 RNF32Q9H0A6 362 aa8.45□□□□□ -1.06
CASP4-210ENST00000531546 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
CASP4-210ENST00000531546 TPP2P29144 1249 aaPredicted RBP8.44□□□□□ -1.06
CASP4-210ENST00000531546 ZSCAN29Q8IWY8 852 aaPredicted RBP8.44□□□□□ -1.06
CASP4-210ENST00000531546 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
CASP4-210ENST00000531546 OXR1Q8N573 874 aa8.44□□□□□ -1.06
CASP4-210ENST00000531546 ADAMTS10Q9H324 1103 aa8.44□□□□□ -1.06
CASP4-210ENST00000531546 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
CASP4-210ENST00000531546 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
CASP4-210ENST00000531546 SEMA7AO75326 666 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 HOXA5P20719 270 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 HSPA2P54652 639 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 RPS26P62854 115 aaKnown RBP8.43□□□□□ -1.06
CASP4-210ENST00000531546 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
CASP4-210ENST00000531546 IRF2BPLQ9H1B7 796 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 GPATCH2Q9NW75 528 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 FHAD1B1AJZ9 1412 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 ASXL2Q76L83 1435 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 ABCA10Q8WWZ4 1543 aa8.43□□□□□ -1.06
CASP4-210ENST00000531546 FITM1A5D6W6 292 aa8.42□□□□□ -1.06
CASP4-210ENST00000531546 PGRP06401 933 aa8.42□□□□□ -1.06
CASP4-210ENST00000531546 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
CASP4-210ENST00000531546 CWC22Q9HCG8 908 aaKnown RBP8.42□□□□□ -1.06
CASP4-210ENST00000531546 DUSP13Q9UII6 198 aa8.42□□□□□ -1.06
CASP4-210ENST00000531546 PTPRMP28827 1452 aa8.42□□□□□ -1.06
CASP4-210ENST00000531546 PEX10O60683 326 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 CDK8P49336 464 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 PDE4BQ07343 736 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 GAB4Q2WGN9 574 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 DHX38Q92620 1227 aaKnown RBP8.41□□□□□ -1.06
CASP4-210ENST00000531546 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 Q96M66 194 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 DPH2Q9BQC3 489 aaPredicted RBP8.41□□□□□ -1.06
CASP4-210ENST00000531546 TJP2Q9UDY2 1190 aa8.41□□□□□ -1.06
CASP4-210ENST00000531546 CUL7Q14999 1698 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 GLI2P10070 1586 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 RUSC2Q8N2Y8 1516 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 PLB1Q6P1J6 1458 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 GFRA2O00451 464 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 TRHRP34981 398 aaPredicted RBP8.4□□□□□ -1.06
CASP4-210ENST00000531546 EGR3Q06889 387 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 BAHD1Q8TBE0 780 aaPredicted RBP8.4□□□□□ -1.06
CASP4-210ENST00000531546 RELTQ969Z4 430 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 FRMD6Q96NE9 622 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 SETDB2Q96T68 719 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 GPR62Q9BZJ7 368 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 MCOLN1Q9GZU1 580 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 DUSP15Q9H1R2 295 aaPredicted RBP8.4□□□□□ -1.06
CASP4-210ENST00000531546 PARD6AQ9NPB6 346 aa8.4□□□□□ -1.06
CASP4-210ENST00000531546 SUPT5HO00267 1087 aaKnown RBP8.39□□□□□ -1.07
CASP4-210ENST00000531546 ZGLP1P0C6A0 271 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 DLG4P78352 724 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 NR0B2Q15466 257 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 ARID3AQ99856 593 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 ZCCHC4Q9H5U6 513 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 KCNH3Q9ULD8 1083 aa8.39□□□□□ -1.07
CASP4-210ENST00000531546 RFXAPO00287 272 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 LTKP29376 864 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 SEPT6Q14141 434 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 ZNF605Q86T29 641 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 TSPYL5Q86VY4 417 aaPredicted RBP8.38□□□□□ -1.07
CASP4-210ENST00000531546 DNAJB8Q8NHS0 232 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
CASP4-210ENST00000531546 C19orf44Q9H6X5 657 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 SP110Q9HB58 689 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 ADAM30Q9UKF2 790 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 MAP3K4Q9Y6R4 1608 aa8.38□□□□□ -1.07
CASP4-210ENST00000531546 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
CASP4-210ENST00000531546 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
CASP4-210ENST00000531546 TCERG1LQ5VWI1 586 aa8.37□□□□□ -1.07
CASP4-210ENST00000531546 MCATQ8IVS2 390 aaKnown RBP8.37□□□□□ -1.07
CASP4-210ENST00000531546 ASB16Q96NS5 453 aa8.37□□□□□ -1.07
CASP4-210ENST00000531546 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
CASP4-210ENST00000531546 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
CASP4-210ENST00000531546 CEP131Q9UPN4 1083 aa8.37□□□□□ -1.07
CASP4-210ENST00000531546 ARID4BQ4LE39 1312 aaPredicted RBP8.36□□□□□ -1.07
CASP4-210ENST00000531546 ABCC2Q92887 1545 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 TEX51A0A1B0GUA7 166 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 BMP7P18075 431 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 CHRNEQ04844 493 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 ZNF385BQ569K4 471 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 TMEM132EQ6IEE7 984 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 DTWD2Q8NBA8 298 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
CASP4-210ENST00000531546 YBX2Q9Y2T7 364 aaKnown RBP8.36□□□□□ -1.07
CASP4-210ENST00000531546 DUSP4Q13115 394 aa8.35□□□□□ -1.07
CASP4-210ENST00000531546 SNX17Q15036 470 aa8.35□□□□□ -1.07
CASP4-210ENST00000531546 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
CASP4-210ENST00000531546 TMEM151BQ8IW70 566 aa8.35□□□□□ -1.07
CASP4-210ENST00000531546 PCDHB5Q9Y5E4 795 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms