RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 KRTAP9-3Q9BYQ3 159 aa8.76□□□□□ -1.01
PTPRK-220ENST00000531466 CWC22Q9HCG8 908 aaKnown RBP8.76□□□□□ -1.01
PTPRK-220ENST00000531466 EBF1Q9UH73 591 aa8.76□□□□□ -1.01
PTPRK-220ENST00000531466 GPR160Q9UJ42 338 aa8.76□□□□□ -1.01
PTPRK-220ENST00000531466 BMP7P18075 431 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 TNNI2P48788 182 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 NR0B2Q15466 257 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 TMEM132EQ6IEE7 984 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 RNF141Q8WVD5 230 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 SGPP1Q9BX95 441 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 PARD6AQ9NPB6 346 aa8.75□□□□□ -1.01
PTPRK-220ENST00000531466 PEX10O60683 326 aa8.74□□□□□ -1.01
PTPRK-220ENST00000531466 SEMA7AO75326 666 aa8.74□□□□□ -1.01
PTPRK-220ENST00000531466 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
PTPRK-220ENST00000531466 ZCCHC4Q9H5U6 513 aa8.74□□□□□ -1.01
PTPRK-220ENST00000531466 CNOT6Q9ULM6 557 aaKnown RBP8.74□□□□□ -1.01
PTPRK-220ENST00000531466 SHISA3A0PJX4 238 aa8.73□□□□□ -1.01
PTPRK-220ENST00000531466 F6X3S4 739 aa8.73□□□□□ -1.01
PTPRK-220ENST00000531466 BNC2Q6ZN30 1099 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-220ENST00000531466 SPPL2CQ8IUH8 684 aa8.73□□□□□ -1.01
PTPRK-220ENST00000531466 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
PTPRK-220ENST00000531466 ZNF552Q9H707 407 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-220ENST00000531466 TEX51A0A1B0GUA7 166 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 PSPNO60542 156 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 TEKQ02763 1124 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 CHRNEQ04844 493 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 KCNA1Q09470 495 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 KREMEN1Q96MU8 473 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 GCM1Q9NP62 436 aa8.72□□□□□ -1.01
PTPRK-220ENST00000531466 BPNT1O95861 308 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 RLBP1P12271 317 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 DUSP4Q13115 394 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 TMEM201Q5SNT2 666 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 RELTQ969Z4 430 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 SHISA4Q96DD7 197 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 KLHL3Q9UH77 587 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
PTPRK-220ENST00000531466 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
PTPRK-220ENST00000531466 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
PTPRK-220ENST00000531466 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
PTPRK-220ENST00000531466 SLFN12Q8IYM2 578 aa8.7□□□□□ -1.02
PTPRK-220ENST00000531466 ANKS4BQ8N8V4 417 aa8.7□□□□□ -1.02
PTPRK-220ENST00000531466 RBM47A0AV96 593 aaKnown RBP8.69□□□□□ -1.02
PTPRK-220ENST00000531466 CHURC1-FNTBB4DL54 471 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 CILPO75339 1184 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 SSPNQ14714 243 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 SNX17Q15036 470 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 ASPNQ9BXN1 380 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 REV1Q9UBZ9 1251 aa8.69□□□□□ -1.02
PTPRK-220ENST00000531466 A0A0G2JLL6 359 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-220ENST00000531466 TAF1CQ15572 869 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-220ENST00000531466 ZNF385BQ569K4 471 aa8.68□□□□□ -1.02
PTPRK-220ENST00000531466 TCERG1LQ5VWI1 586 aa8.68□□□□□ -1.02
PTPRK-220ENST00000531466 CCDC84Q86UT8 332 aaPredicted RBP8.68□□□□□ -1.02
PTPRK-220ENST00000531466 LINC01599Q8WXQ3 324 aa8.68□□□□□ -1.02
PTPRK-220ENST00000531466 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
PTPRK-220ENST00000531466 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
PTPRK-220ENST00000531466 FAM221AA4D161 298 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 RFXAPO00287 272 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 GRIN3BO60391 1043 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 EFEMP2O95967 443 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 F13A1P00488 732 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 CAMK2GQ13555 558 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-220ENST00000531466 EAPPQ56P03 285 aaPredicted RBP8.67□□□□□ -1.02
PTPRK-220ENST00000531466 ADGRF1Q5T601 910 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 CCDC74BQ96LY2 380 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 KCNC2Q96PR1 638 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
PTPRK-220ENST00000531466 NOTOA8MTQ0 251 aa8.66□□□□□ -1.02
PTPRK-220ENST00000531466 USP2O75604 605 aaPredicted RBP8.66□□□□□ -1.02
PTPRK-220ENST00000531466 PF4P02776 101 aa8.66□□□□□ -1.02
PTPRK-220ENST00000531466 PHACTR4Q8IZ21 702 aa8.66□□□□□ -1.02
PTPRK-220ENST00000531466 KIF2CQ99661 725 aa8.66□□□□□ -1.02
PTPRK-220ENST00000531466 OR14I1A6ND48 311 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 TRIM13O60858 407 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 DNAJA2O60884 412 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 HTR3BO95264 441 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 PI3P19957 117 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 RPL10P27635 214 aaKnown RBP8.65□□□□□ -1.02
PTPRK-220ENST00000531466 ST13P50502 369 aaKnown RBP8.65□□□□□ -1.02
PTPRK-220ENST00000531466 LMNB2Q03252 620 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 PSMD2Q13200 908 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 NLRX1Q86UT6 975 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 GATAD2BQ8WXI9 593 aa8.65□□□□□ -1.02
PTPRK-220ENST00000531466 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-220ENST00000531466 ANKRD33BA6NCL7 494 aa8.64□□□□□ -1.03
PTPRK-220ENST00000531466 FOXD2O60548 495 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-220ENST00000531466 WAPLQ7Z5K2 1190 aa8.64□□□□□ -1.03
PTPRK-220ENST00000531466 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-220ENST00000531466 PANK1Q8TE04 598 aa8.64□□□□□ -1.03
PTPRK-220ENST00000531466 ZMYM5Q9UJ78 669 aa8.64□□□□□ -1.03
PTPRK-220ENST00000531466 ZNF281Q9Y2X9 895 aa8.64□□□□□ -1.03
PTPRK-220ENST00000531466 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
PTPRK-220ENST00000531466 CTSHP09668 335 aa8.63□□□□□ -1.03
PTPRK-220ENST00000531466 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
PTPRK-220ENST00000531466 SRSF3P84103 164 aaKnown RBP8.63□□□□□ -1.03
PTPRK-220ENST00000531466 NMIQ13287 307 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-220ENST00000531466 FOXP3Q9BZS1 431 aa8.63□□□□□ -1.03
PTPRK-220ENST00000531466 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-220ENST00000531466 MBD1Q9UIS9 605 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms