RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 GINM1Q9NU53 330 aa22.27■■□□□ 1.16
SMPD1-205ENST00000531303 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
SMPD1-205ENST00000531303 HPS5Q9UPZ3 1129 aa22.27■■□□□ 1.16
SMPD1-205ENST00000531303 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 GOLGA8AA7E2F4 631 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 DTNBO60941 627 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 PTPRAP18433 802 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 METAP2P50579 478 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMPD1-205ENST00000531303 ZYXQ15942 572 aaKnown RBP22.26■■□□□ 1.15
SMPD1-205ENST00000531303 NOL9Q5SY16 702 aaKnown RBP22.26■■□□□ 1.15
SMPD1-205ENST00000531303 ANKRD13AQ8IZ07 590 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 C2orf69Q8N8R5 385 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 SH2B1Q9NRF2 756 aaPredicted RBP22.26■■□□□ 1.15
SMPD1-205ENST00000531303 SNCAIPQ9Y6H5 919 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 ZHX2Q9Y6X8 837 aa22.26■■□□□ 1.15
SMPD1-205ENST00000531303 PFKFB2O60825 505 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 MAP3K11Q16584 847 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 CST9Q5W186 159 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 RASGRP2Q7LDG7 609 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 MKL1Q969V6 931 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 FEZ1Q99689 392 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 PAPPA2Q9BXP8 1791 aa22.25■■□□□ 1.15
SMPD1-205ENST00000531303 DDAH1O94760 285 aa22.24■■□□□ 1.15
SMPD1-205ENST00000531303 SCRN1Q12765 414 aa22.24■■□□□ 1.15
SMPD1-205ENST00000531303 TROAPQ12815 778 aa22.24■■□□□ 1.15
SMPD1-205ENST00000531303 CNKSR2Q8WXI2 1034 aa22.24■■□□□ 1.15
SMPD1-205ENST00000531303 ISY1Q9ULR0 285 aaKnown RBP22.24■■□□□ 1.15
SMPD1-205ENST00000531303 TOMM70O94826 608 aa22.23■■□□□ 1.15
SMPD1-205ENST00000531303 HSP90AA1P07900 732 aaKnown RBP22.23■■□□□ 1.15
SMPD1-205ENST00000531303 ST3GAL1Q11201 340 aa22.23■■□□□ 1.15
SMPD1-205ENST00000531303 SPP2Q13103 211 aa22.23■■□□□ 1.15
SMPD1-205ENST00000531303 RTN1Q16799 776 aa22.23■■□□□ 1.15
SMPD1-205ENST00000531303 FANCBQ8NB91 859 aa22.23■■□□□ 1.15
SMPD1-205ENST00000531303 TRIM75PA6NK02 468 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 CALM1P0DP23 149 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 CALM2P0DP24 149 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 CALM3P0DP25 149 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 SLFN13Q68D06 897 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
SMPD1-205ENST00000531303 GTF3C6Q969F1 213 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 IPO9Q96P70 1041 aaKnown RBP22.22■■□□□ 1.15
SMPD1-205ENST00000531303 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 TMX2Q9Y320 296 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 PHIPQ8WWQ0 1821 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 PPFIA3O75145 1194 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 CDC27P30260 824 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 ADD1P35611 737 aaKnown RBP22.22■■□□□ 1.15
SMPD1-205ENST00000531303 FKBP1BP68106 108 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 LDLRAD1Q5T700 205 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 USP17L2Q6R6M4 530 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 SPICE1Q8N0Z3 855 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 CTCFLQ8NI51 663 aaPredicted RBP22.22■■□□□ 1.15
SMPD1-205ENST00000531303 SH2D4AQ9H788 454 aa22.22■■□□□ 1.15
SMPD1-205ENST00000531303 FRMPD2Q68DX3 1309 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-205ENST00000531303 PASKQ96RG2 1323 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 F5H6K3 240 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 GOLGA8HP0CJ92 632 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 KLRC3Q07444 240 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 MTMR2Q13614 643 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 CCDC96Q2M329 555 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 ZNF280CQ8ND82 737 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 SLC10A4Q96EP9 437 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 OTUD5Q96G74 571 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 WDR18Q9BV38 432 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
SMPD1-205ENST00000531303 FAM217BQ9NTX9 383 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-205ENST00000531303 BAZ2BQ9UIF8 2168 aaKnown RBP22.2■■□□□ 1.14
SMPD1-205ENST00000531303 USP17L10C9JJH3 530 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 CPLX1O14810 134 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 NDUFB10O96000 172 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 PARP1P09874 1014 aaKnown RBP22.2■■□□□ 1.14
SMPD1-205ENST00000531303 PDHBP11177 359 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 DGKZQ13574 1117 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 CUL4AQ13619 759 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 GRM4Q14833 912 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 ERO1BQ86YB8 467 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 CMTR1Q8N1G2 835 aaKnown RBP22.2■■□□□ 1.14
SMPD1-205ENST00000531303 CCDC82Q8N4S0 544 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 NUP88Q99567 741 aaPredicted RBP22.2■■□□□ 1.14
SMPD1-205ENST00000531303 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
SMPD1-205ENST00000531303 STAG2Q8N3U4 1231 aa22.19■■□□□ 1.14
SMPD1-205ENST00000531303 GMCL1P1Q8NEA9 526 aa22.19■■□□□ 1.14
SMPD1-205ENST00000531303 AFG3L2Q9Y4W6 797 aa22.19■■□□□ 1.14
SMPD1-205ENST00000531303 KIF5BP33176 963 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 SLC1A4P43007 532 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 RCAN1P53805 252 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 KCTD1Q719H9 257 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 OPTNQ96CV9 577 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 VCPKMTQ9H867 229 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 MAD2L2Q9UI95 211 aa22.18■■□□□ 1.14
SMPD1-205ENST00000531303 CCDC196A0A1B0GTZ2 297 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 SPDYE5A6NIY4 337 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 DHX16O60231 1041 aaKnown RBP22.17■■□□□ 1.14
SMPD1-205ENST00000531303 PLEKHA8P1O95397 391 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 BACE1P56817 501 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 HUNKP57058 714 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 KIAA1683Q9H0B3 1180 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
SMPD1-205ENST00000531303 RBM28Q9NW13 759 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms