RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ATP5J	P18859	108 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ADD2	P35612	726 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SIRT2	Q8IXJ6	389 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	TDH	Q8IZJ6	230 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	MB21D1	Q8N884	522 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SHCBP1	Q8NEM2	672 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	TANGO6	Q9C0B7	1094 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SH2D4A	Q9H788	454 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ARMT1	Q9H993	441 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DDX20	Q9UHI6	824 aa	Known RBP	18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	COG6	Q9Y2V7	657 aa		18.81	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SZT2	Q5T011	3432 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	EVX2	Q03828	476 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	LRRC26	Q2I0M4	334 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	LRIT3	Q3SXY7	679 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	AMOTL1	Q8IY63	956 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SLC44A5	Q8NCS7	719 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	NPLOC4	Q8TAT6	608 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	CCDC17	Q96LX7	622 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SPATC1L	Q9H0A9	340 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	BOLA2	Q9H3K6	86 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ARHGEF10L	Q9HCE6	1279 aa		18.8	■□□□□ 0.6
TM9SF1-209	ENST00000530468	MBD4	O95243	580 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	CYP2D6	P10635	497 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	CNGA1	P29973	690 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ICA1	Q05084	483 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	OLFML2B	Q68BL8	750 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DPP9	Q86TI2	863 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DDRGK1	Q96HY6	314 aa		18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	UBE2O	Q9C0C9	1292 aa	Known RBP	18.79	■□□□□ 0.6
TM9SF1-209	ENST00000530468	IGHA2	P01877	340 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ADORA2A	P29274	412 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	CYP2C19	P33261	490 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DYNLL2	Q96FJ2	89 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	HAUS7	Q99871	368 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	BCL11A	Q9H165	835 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SLC5A4	Q9NY91	659 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	TMX2	Q9Y320	296 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ZNF236	Q9UL36	1845 aa		18.78	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DNM1L	O00429	736 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	PRKAB2	O43741	272 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	CYBA	P13498	195 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	AKR1B1	P15121	316 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ERCC3	P19447	782 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	DSG3	P32926	999 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	UBE3C	Q15386	1083 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	C12orf60	Q5U649	245 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	ABRA	Q8N0Z2	381 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	MROH8	Q9H579	483 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468	VCPKMT	Q9H867	229 aa		18.77	■□□□□ 0.6
TM9SF1-209	ENST00000530468		A0A0G2JMZ2	1700 aa		18.77	■□□□□ 0.59
TM9SF1-209	ENST00000530468	WDR46	O15213	610 aa	Known RBP	18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	FLOT1	O75955	427 aa		18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	KIAA1755	Q5JYT7	1200 aa		18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ZSCAN25	Q6NSZ9	544 aa		18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	C16orf86	Q6ZW13	317 aa		18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	FRMPD3	Q5JV73	1810 aa		18.76	■□□□□ 0.59
TM9SF1-209	ENST00000530468	USP17L12	C9JPN9	530 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	USP17L21	D6R901	530 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	CDK8	P49336	464 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SIAH1	Q8IUQ4	282 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	TRPV1	Q8NER1	839 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ATG4C	Q96DT6	458 aa		18.75	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SLC25A27	O95847	323 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	PLS1	Q14651	629 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SLFNL1	Q499Z3	407 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	NCAPG2	Q86XI2	1143 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	CLEC10A	Q8IUN9	316 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SPICE1	Q8N0Z3	855 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ARRDC4	Q8NCT1	418 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	LRRCC1	Q9C099	1032 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	KANSL2	Q9H9L4	492 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SLC4A4	Q9Y6R1	1079 aa		18.74	■□□□□ 0.59
TM9SF1-209	ENST00000530468	RLF	Q13129	1914 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SEPT4	O43236	478 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	COBL	O75128	1261 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	MDM2	Q00987	491 aa	Predicted RBP	18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	DEFB123	Q8N688	67 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	SLC17A8	Q8NDX2	589 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	RCAN3	Q9UKA8	241 aa		18.73	■□□□□ 0.59
TM9SF1-209	ENST00000530468	CYP2D7	A0A087X1C5	515 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	KBTBD13	C9JR72	458 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	FCER1A	P12319	257 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	GOPC	Q9HD26	462 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	PRKAG2	Q9UGJ0	569 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ADAMTS5	Q9UNA0	930 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	MYH8	P13535	1937 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	LAMA3	Q16787	3333 aa		18.72	■□□□□ 0.59
TM9SF1-209	ENST00000530468	EEF2	P13639	858 aa	Known RBP	18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	ATN1	P54259	1190 aa	Predicted RBP	18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	RTP1	P59025	263 aa		18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	TMEM132B	Q14DG7	1078 aa		18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	CTR9	Q6PD62	1173 aa		18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	MAML3	Q96JK9	1138 aa		18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	PUS7L	Q9H0K6	701 aa	Known RBP	18.71	■□□□□ 0.59
TM9SF1-209	ENST00000530468	NRBP1	Q9UHY1	535 aa		18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms