RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
CASP4-208ENST00000530309 ZNF512BQ96KM6 892 aaPredicted RBP9.04□□□□□ -0.96
CASP4-208ENST00000530309 FBXL18Q96ME1 805 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 DEPDC7Q96QD5 511 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 PIF1Q9H611 641 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 GTF2IRD1Q9UHL9 959 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 CNTNAP4Q9C0A0 1308 aa9.04□□□□□ -0.96
CASP4-208ENST00000530309 CCDC85CA6NKD9 419 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 IGLV1-40P01703 118 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 TP53P04637 393 aaPredicted RBP9.03□□□□□ -0.96
CASP4-208ENST00000530309 F13BP05160 661 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 FSTP19883 344 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 TDRD10Q5VZ19 366 aaKnown RBP9.03□□□□□ -0.96
CASP4-208ENST00000530309 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 NOP9Q86U38 636 aaKnown RBP9.03□□□□□ -0.96
CASP4-208ENST00000530309 HEXIM2Q96MH2 286 aaKnown RBP9.03□□□□□ -0.96
CASP4-208ENST00000530309 FAM86C1Q9NVL1 165 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 SNTG2Q9NY99 539 aa9.03□□□□□ -0.96
CASP4-208ENST00000530309 PDPK1O15530 556 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 RASA3Q14644 834 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 RSPO4Q2I0M5 234 aaPredicted RBP9.02□□□□□ -0.97
CASP4-208ENST00000530309 SFRP5Q5T4F7 317 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 MRM1Q6IN84 353 aaKnown RBP9.02□□□□□ -0.97
CASP4-208ENST00000530309 GPAT2Q6NUI2 795 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 MRFAP1L1Q96HT8 127 aa9.02□□□□□ -0.97
CASP4-208ENST00000530309 MKRN2Q9H000 416 aaKnown RBP9.02□□□□□ -0.97
CASP4-208ENST00000530309 FAM221BA6H8Z2 402 aa9.01□□□□□ -0.97
CASP4-208ENST00000530309 IGF2BP3O00425 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
CASP4-208ENST00000530309 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
CASP4-208ENST00000530309 AXDND1Q5T1B0 1012 aaPredicted RBP9.01□□□□□ -0.97
CASP4-208ENST00000530309 EEPD1Q7L9B9 569 aa9.01□□□□□ -0.97
CASP4-208ENST00000530309 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
CASP4-208ENST00000530309 METTL22Q9BUU2 404 aaPredicted RBP9.01□□□□□ -0.97
CASP4-208ENST00000530309 ATG3Q9NT62 314 aa9.01□□□□□ -0.97
CASP4-208ENST00000530309 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
CASP4-208ENST00000530309 WDR64B1ANS9 1081 aa9□□□□□ -0.97
CASP4-208ENST00000530309 IGHA1P01876 353 aa9□□□□□ -0.97
CASP4-208ENST00000530309 KIR3DL1P43629 444 aa9□□□□□ -0.97
CASP4-208ENST00000530309 RASGRF1Q13972 1273 aa9□□□□□ -0.97
CASP4-208ENST00000530309 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
CASP4-208ENST00000530309 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
CASP4-208ENST00000530309 SLC51AQ86UW1 340 aa9□□□□□ -0.97
CASP4-208ENST00000530309 HAUS7Q99871 368 aa9□□□□□ -0.97
CASP4-208ENST00000530309 CBX7O95931 251 aa8.99□□□□□ -0.97
CASP4-208ENST00000530309 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
CASP4-208ENST00000530309 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
CASP4-208ENST00000530309 ST13P5Q8NFI4 369 aaPredicted RBP8.99□□□□□ -0.97
CASP4-208ENST00000530309 OSBPL1AQ9BXW6 950 aa8.99□□□□□ -0.97
CASP4-208ENST00000530309 ANKRD34BA5PLL1 514 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 CBFA2T2O43439 604 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 DYRK3O43781 588 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 LRRN2O75325 713 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 EPHX1P07099 455 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 ZNF865P0CJ78 1059 aaPredicted RBP8.98□□□□□ -0.97
CASP4-208ENST00000530309 ZNF143P52747 638 aaPredicted RBP8.98□□□□□ -0.97
CASP4-208ENST00000530309 TCEAL1Q15170 157 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 HEATR6Q6AI08 1181 aaKnown RBP8.98□□□□□ -0.97
CASP4-208ENST00000530309 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 C7orf61Q8IZ16 206 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 Q96M66 194 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 EPN3Q9H201 632 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 KCNH3Q9ULD8 1083 aa8.98□□□□□ -0.97
CASP4-208ENST00000530309 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 PRR33A8MZF0 331 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 SUSD5O60279 629 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 NAT2P11245 290 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 IFRD2Q12894 506 aaPredicted RBP8.97□□□□□ -0.97
CASP4-208ENST00000530309 DTWD2Q8NBA8 298 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 KLHL25Q9H0H3 589 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 SUSD2Q9UGT4 822 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 PCDHB12Q9Y5F1 795 aa8.97□□□□□ -0.97
CASP4-208ENST00000530309 RBAK-RBAKDNI3L0D1 243 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 SHOXO15266 292 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 CD247P20963 164 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 OXCT1P55809 520 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 MTERF2Q49AM1 385 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 ZDHHC13Q8IUH4 622 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 MFSD4AQ8N468 514 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 ZNF669Q96BR6 464 aaPredicted RBP8.96□□□□□ -0.98
CASP4-208ENST00000530309 DNAJC7Q99615 494 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 APBA2Q99767 749 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 FBXL21Q9UKT6 434 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 ZNF451Q9Y4E5 1061 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 CAPN6Q9Y6Q1 641 aa8.96□□□□□ -0.98
CASP4-208ENST00000530309 SLC10A6Q3KNW5 377 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 ARHGAP27Q6ZUM4 889 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 FAM181AQ8N9Y4 354 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 PIWIL2Q8TC59 973 aaKnown RBP8.95□□□□□ -0.98
CASP4-208ENST00000530309 PRDM14Q9GZV8 571 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 LRRC4CQ9HCJ2 640 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 GP6Q9HCN6 339 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 WHRNQ9P202 907 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 LEMD3Q9Y2U8 911 aa8.95□□□□□ -0.98
CASP4-208ENST00000530309 FAM155AB1AL88 458 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms