RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 MOV10L1Q9BXT6 1211 aaKnown RBP13.81□□□□□ -0.2
SF3B2-208ENST00000529994 PRDM6Q9NQX0 595 aa13.81□□□□□ -0.2
SF3B2-208ENST00000529994 PDLIM7Q9NR12 457 aa13.81□□□□□ -0.2
SF3B2-208ENST00000529994 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
SF3B2-208ENST00000529994 IGHA2P01877 340 aa13.8□□□□□ -0.2
SF3B2-208ENST00000529994 SMAD3P84022 425 aaKnown RBP13.8□□□□□ -0.2
SF3B2-208ENST00000529994 SEPT2Q15019 361 aa13.8□□□□□ -0.2
SF3B2-208ENST00000529994 MAGEB6Q8N7X4 407 aa13.8□□□□□ -0.2
SF3B2-208ENST00000529994 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
SF3B2-208ENST00000529994 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
SF3B2-208ENST00000529994 COBLO75128 1261 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 ERCC3P19447 782 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 SHMT1P34896 483 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 PLCD1P51178 756 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 PLS1Q14651 629 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 OLFML2BQ68BL8 750 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
SF3B2-208ENST00000529994 EHD4Q9H223 541 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
SF3B2-208ENST00000529994 ZNF236Q9UL36 1845 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 MPHOSPH10O00566 681 aaKnown RBP13.78□□□□□ -0.2
SF3B2-208ENST00000529994 SEPT4O43236 478 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
SF3B2-208ENST00000529994 ITGB8P26012 769 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 EPHB4P54760 987 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 EVX2Q03828 476 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 TLE2Q04725 743 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 COG2Q14746 738 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 SNX17Q15036 470 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 LRRC41Q15345 812 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
SF3B2-208ENST00000529994 TTC6Q86TZ1 520 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 RNPC3Q96LT9 517 aaKnown RBP13.78□□□□□ -0.2
SF3B2-208ENST00000529994 SPATC1LQ9H0A9 340 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
SF3B2-208ENST00000529994 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
SF3B2-208ENST00000529994 STRNO43815 780 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-208ENST00000529994 MYO9BQ13459 2157 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 POLA2Q14181 598 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 NCAPG2Q86XI2 1143 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.21
SF3B2-208ENST00000529994 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.21
SF3B2-208ENST00000529994 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
SF3B2-208ENST00000529994 KIAA1755Q5JYT7 1200 aa13.76□□□□□ -0.21
SF3B2-208ENST00000529994 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
SF3B2-208ENST00000529994 HOXC10Q9NYD6 342 aa13.76□□□□□ -0.21
SF3B2-208ENST00000529994 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
SF3B2-208ENST00000529994 MYH8P13535 1937 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 PQBP1O60828 265 aaKnown RBP13.75□□□□□ -0.21
SF3B2-208ENST00000529994 PGK1P00558 417 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 CLTBP09497 229 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 RLBP1P12271 317 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 GRIN2CQ14957 1233 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 SPICE1Q8N0Z3 855 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
SF3B2-208ENST00000529994 EAF2Q96CJ1 260 aaPredicted RBP13.75□□□□□ -0.21
SF3B2-208ENST00000529994 ATG4CQ96DT6 458 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 MAML3Q96JK9 1138 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
SF3B2-208ENST00000529994 FLOT1O75955 427 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 RAG1P15918 1043 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 DSG3P32926 999 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 MAP3K12Q12852 859 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 C1orf53Q5VUE5 145 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 CERS3Q8IU89 383 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 SLC44A5Q8NCS7 719 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 SHCBP1Q8NEM2 672 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 PANK1Q8TE04 598 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-208ENST00000529994 MROH8Q9H579 483 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 PHF24Q9UPV7 400 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 MUC3AQ02505 3323 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
SF3B2-208ENST00000529994 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 IGSF3O75054 1194 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 PGK2P07205 417 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 CYP2D6P10635 497 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 RARBP10826 455 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 FCER1AP12319 257 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 TAL1P17542 331 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-208ENST00000529994 GABPAQ06546 454 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
SF3B2-208ENST00000529994 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 RAPGEFL1Q9UHV5 662 aa13.73□□□□□ -0.21
SF3B2-208ENST00000529994 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms