RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 HMX2A2RU54 273 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 C9IYK1 514 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 NBPF12Q5TAG4 269 aaPredicted RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 SDE2Q6IQ49 451 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 FAM177A1Q8N128 213 aaPredicted RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 COX4I2Q96KJ9 171 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 EPN3Q9H201 632 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 PRDM5Q9NQX1 630 aaPredicted RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 TBX22Q9Y458 520 aa5.83□□□□□ -1.48
SVIP-203ENST00000529848 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
SVIP-203ENST00000529848 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 ANKRD34BA5PLL1 514 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 AGRPO00253 132 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 LEFTY1O75610 366 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 EOMESO95936 686 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
SVIP-203ENST00000529848 TCEAL1Q15170 157 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 SV2CQ496J9 727 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 CYP27C1Q4G0S4 372 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 AXDND1Q5T1B0 1012 aaPredicted RBP5.82□□□□□ -1.48
SVIP-203ENST00000529848 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 PRR23CQ6ZRP0 262 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 ADAT2Q7Z6V5 191 aaKnown RBP5.82□□□□□ -1.48
SVIP-203ENST00000529848 ZAR1Q86SH2 424 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 ZNF669Q96BR6 464 aaPredicted RBP5.82□□□□□ -1.48
SVIP-203ENST00000529848 FBXL18Q96ME1 805 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 APBA2Q99767 749 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 HAUS7Q99871 368 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 GBP3Q9H0R5 595 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 CWC22Q9HCG8 908 aaKnown RBP5.82□□□□□ -1.48
SVIP-203ENST00000529848 GTF2IRD1Q9UHL9 959 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 PFDN2Q9UHV9 154 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 FBXL21Q9UKT6 434 aa5.82□□□□□ -1.48
SVIP-203ENST00000529848 CADPSQ9ULU8 1353 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 IQCA1LA6NCM1 817 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 CLSTN1O94985 981 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 EPHX1P07099 455 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 CYP27A1Q02318 531 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
SVIP-203ENST00000529848 DCAF15Q66K64 600 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 GPAT2Q6NUI2 795 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 OGFOD3Q6PK18 319 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 ARHGAP27Q6ZUM4 889 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 SPATC1Q76KD6 591 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 C7orf61Q8IZ16 206 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 FBXL6Q8N531 539 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 PPP1R14AQ96A00 147 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 MFSD14AQ96MC6 490 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 LRP2BPQ9P2M1 347 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 ZMYM5Q9UJ78 669 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 KCNH3Q9ULD8 1083 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 SUGT1Q9Y2Z0 365 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 PCDHB12Q9Y5F1 795 aa5.81□□□□□ -1.48
SVIP-203ENST00000529848 PPM1BO75688 479 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 CBX7O95931 251 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 PROCP04070 461 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 ITGA4P13612 1032 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 CD247P20963 164 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 KIR3DL1P43629 444 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 SLC10A6Q3KNW5 377 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 ANKRD39Q53RE8 183 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 NOL9Q5SY16 702 aaKnown RBP5.8□□□□□ -1.48
SVIP-203ENST00000529848 DUSP27Q5VZP5 1158 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 LRRC47Q8N1G4 583 aaKnown RBP5.8□□□□□ -1.48
SVIP-203ENST00000529848 LILRB2Q8N423 598 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 SH3TC2Q8TF17 1288 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 VWCEQ96DN2 955 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 FGD4Q96M96 766 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 KLHL25Q9H0H3 589 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 ASCC2Q9H1I8 757 aaPredicted RBP5.8□□□□□ -1.48
SVIP-203ENST00000529848 TPSG1Q9NRR2 321 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 WHRNQ9P202 907 aa5.8□□□□□ -1.48
SVIP-203ENST00000529848 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
SVIP-203ENST00000529848 GNAT3A8MTJ3 354 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 GSC2O15499 205 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 CBFA2T2O43439 604 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 DIAPH1O60610 1272 aaKnown RBP5.79□□□□□ -1.48
SVIP-203ENST00000529848 ADMP35318 185 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 NBPF9Q3BBW0 867 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 RNF43Q68DV7 783 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 NLGN1Q8N2Q7 840 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 THAP3Q8WTV1 239 aaPredicted RBP5.79□□□□□ -1.48
SVIP-203ENST00000529848 GATA6Q92908 595 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 RNPC3Q96LT9 517 aaKnown RBP5.79□□□□□ -1.48
SVIP-203ENST00000529848 DBNDD2Q9BQY9 259 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 SPATA9Q9BWV2 254 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 GP6Q9HCN6 339 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 ZNF451Q9Y4E5 1061 aa5.79□□□□□ -1.48
SVIP-203ENST00000529848 FAM170BA6NMN3 283 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 NOP56O00567 594 aaKnown RBP5.78□□□□□ -1.48
SVIP-203ENST00000529848 LRRN2O75325 713 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 NFIAQ12857 509 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 ZNF765Q7L2R6 523 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 MFSD4AQ8N468 514 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 CRACR2BQ8N4Y2 399 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms