RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 PROCA1Q8NCQ7 364 aaPredicted RBP13.78□□□□□ -0.2
C9orf135-207ENST00000529446 KIF2CQ99661 725 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 ZKSCAN3Q9BRR0 538 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 LY9Q9HBG7 655 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 TMOD4Q9NZQ9 345 aa13.78□□□□□ -0.2
C9orf135-207ENST00000529446 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 CCDC69A6NI79 296 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 TRIM75PA6NK02 468 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 CETPP11597 493 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 GJA5P36382 358 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 RCAN1P53805 252 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 CHST3Q7LGC8 479 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 ACER1Q8TDN7 264 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 PHIPQ8WWQ0 1821 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 MAP3K14Q99558 947 aa13.77□□□□□ -0.21
C9orf135-207ENST00000529446 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
C9orf135-207ENST00000529446 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
C9orf135-207ENST00000529446 FAM155AB1AL88 458 aaPredicted RBP13.76□□□□□ -0.21
C9orf135-207ENST00000529446 F5H6K3 240 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CALM1P0DP23 149 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CALM2P0DP24 149 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CALM3P0DP25 149 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 NEK4P51957 841 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 KLRC3Q07444 240 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 SREBF2Q12772 1141 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.21
C9orf135-207ENST00000529446 MTMR2Q13614 643 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 Q6ZUG5 572 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
C9orf135-207ENST00000529446 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 GMCL1Q96IK5 515 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 CAPNS2Q96L46 248 aa13.76□□□□□ -0.21
C9orf135-207ENST00000529446 TESPA1A2RU30 521 aaPredicted RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 ST18O60284 1047 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 DDAH1O94760 285 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 CPA1P15085 419 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 HMGCS2P54868 508 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 EVCP57679 992 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 COL9A3Q14050 684 aaPredicted RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 DCAF4Q8WV16 495 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 ZCCHC17Q9NP64 241 aaKnown RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
C9orf135-207ENST00000529446 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
C9orf135-207ENST00000529446 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 NDUFB10O96000 172 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 SNHG28P0DPA3 235 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 MAP2K2P36507 400 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 MCM2P49736 904 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 TROAPQ12815 778 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 CCL15Q16663 113 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 GPATCH4Q5T3I0 446 aaKnown RBP13.74□□□□□ -0.21
C9orf135-207ENST00000529446 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 BRF1Q92994 677 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
C9orf135-207ENST00000529446 LOC285556D6RIA3 1793 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
C9orf135-207ENST00000529446 BMP3P12645 472 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 VCAM1P19320 739 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 HOXA7P31268 230 aaPredicted RBP13.73□□□□□ -0.21
C9orf135-207ENST00000529446 KIF5BP33176 963 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 SLC1A4P43007 532 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
C9orf135-207ENST00000529446 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
C9orf135-207ENST00000529446 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 ANKRD23Q86SG2 305 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 ZNF274Q96GC6 653 aaPredicted RBP13.73□□□□□ -0.21
C9orf135-207ENST00000529446 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
C9orf135-207ENST00000529446 NID2Q14112 1375 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 CCDC196A0A1B0GTZ2 297 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms