RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 PLEKHH3Q7Z736 793 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 LPAR1Q92633 364 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 DEFB118Q96PH6 123 aa16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHRDL2-205ENST00000528471 ROBO3Q96MS0 1386 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 M0R2C6 588 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 SGPL1O95470 568 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 RGS2P41220 211 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 LBX2Q6XYB7 198 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 TRIB2Q92519 343 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 FRMPD3Q5JV73 1810 aa16.63■□□□□ 0.25
CHRDL2-205ENST00000528471 ZNF236Q9UL36 1845 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 CNMDO75829 334 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 TFRCP02786 760 aaKnown RBP16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 XRCC5P13010 732 aaKnown RBP16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 AAMPQ13685 434 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 COG2Q14746 738 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 APBA2Q99767 749 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 NACAP1Q9BZK3 213 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 VCPKMTQ9H867 229 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 HOXC10Q9NYD6 342 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 IVNS1ABPQ9Y6Y0 642 aa16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
CHRDL2-205ENST00000528471 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 RAD21O60216 631 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 FLOT1O75955 427 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 CAPN2P17655 700 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 HTATIP2Q9BUP3 242 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
CHRDL2-205ENST00000528471 RPTORQ8N122 1335 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 PRKAR2AP13861 404 aaKnown RBP16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 TRIM32Q13049 653 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 MORN1Q5T089 497 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 SIAH1Q8IUQ4 282 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 DPF3Q92784 378 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
CHRDL2-205ENST00000528471 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 RASA1P20936 1047 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 USP6NLQ92738 828 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 NAPBQ9H115 298 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
CHRDL2-205ENST00000528471 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 PTPREP23469 700 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 PLS1Q14651 629 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 EVI5LQ96CN4 794 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 SPATC1LQ9H0A9 340 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 CRISPLD2Q9H0B8 497 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 RWDD1Q9H446 243 aaPredicted RBP16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 STAP2Q9UGK3 403 aa16.58■□□□□ 0.24
CHRDL2-205ENST00000528471 DSG3P32926 999 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 PDE1AP54750 535 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 CCL14Q16627 93 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 MAP3K21Q5TCX8 1036 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 MOV10L1Q9BXT6 1211 aaKnown RBP16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 LNPKQ9C0E8 428 aa16.57■□□□□ 0.24
CHRDL2-205ENST00000528471 PRDM1O75626 825 aa16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 PDE4BQ07343 736 aa16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 GRB14Q14449 540 aa16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 ANKLE1Q8NAG6 615 aa16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 SHCBP1Q8NEM2 672 aa16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHRDL2-205ENST00000528471 H0YGN5 161 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 ERCC3P19447 782 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 CACNB2Q08289 660 aaPredicted RBP16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 FAM83BQ5T0W9 1011 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 MFSD14CQ5VZR4 134 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 NCAPG2Q86XI2 1143 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 EXOC6Q8TAG9 804 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 MROH8Q9H579 483 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms