RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
ECHDC1-220ENST00000528402 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
ECHDC1-220ENST00000528402 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 BECN2A8MW95 431 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 GABPAQ06546 454 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 IQCB1Q15051 598 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 DOK7Q18PE1 504 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 CERS5Q8N5B7 392 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 CCDC12Q8WUD4 166 aaPredicted RBP16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 TNFRSF25Q93038 417 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 PYM1Q9BRP8 204 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 SPZ1Q9BXG8 430 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 FBXO2Q9UK22 296 aaPredicted RBP16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
ECHDC1-220ENST00000528402 SMTNL1A8MU46 457 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 hCG_1984214I3L0E3 225 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 NLRP12P59046 1061 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 SARM1Q6SZW1 724 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 LUZP1Q86V48 1076 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 ZNF713Q8N859 430 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 DAGLBQ8NCG7 672 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 OXER1Q8TDS5 423 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 EHD4Q9H223 541 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 DHX36Q9H2U1 1008 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 TUBE1Q9UJT0 475 aa16.92■□□□□ 0.3
ECHDC1-220ENST00000528402 ZNF500O60304 480 aaPredicted RBP16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 PARP1P09874 1014 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 TPM4P67936 248 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 SLC16A10Q8TF71 515 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 SERPINB13Q9UIV8 391 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 PCDHB6Q9Y5E3 794 aa16.91■□□□□ 0.3
ECHDC1-220ENST00000528402 CDC25BP30305 580 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 CRKP46108 304 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 PLCB2Q00722 1185 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 NPY5RQ15761 445 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 BLIDQ8IZY5 108 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 SERPINA10Q9UK55 444 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 PCDHA4Q9UN74 947 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 MYH8P13535 1937 aa16.9■□□□□ 0.3
ECHDC1-220ENST00000528402 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 MYO1BO43795 1136 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 CDC42EP5Q6NZY7 148 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 RGS17Q9UGC6 210 aaPredicted RBP16.89■□□□□ 0.29
ECHDC1-220ENST00000528402 IGKV6D-41A0A0C4DH26 115 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 ECE2O60344 883 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 BAG6P46379 1132 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 ASPRV1Q53RT3 343 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 DACT2Q5SW24 774 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 ARL6IP4Q66PJ3 421 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 SHISA4Q96DD7 197 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 RRP36Q96EU6 259 aaKnown RBP16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 CLIC6Q96NY7 704 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 TRIM5Q9C035 493 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 BARHL2Q9NY43 387 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
ECHDC1-220ENST00000528402 GNA11P29992 359 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 ZNF75DP51815 510 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 ATP2C1P98194 919 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 PICALMQ13492 652 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 CT47A1Q5JQC4 288 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 C11orf57Q6ZUT1 292 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 RTKN2Q8IZC4 609 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 STAG2Q8N3U4 1231 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 hCG_1642624A0A1W2PR95 340 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 IKBKBO14920 756 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 TTLL1O95922 423 aa16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 FOXP4Q8IVH2 680 aaPredicted RBP16.87■□□□□ 0.29
ECHDC1-220ENST00000528402 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms