RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 NBPF12Q5TAG4 269 aaPredicted RBP9.13□□□□□ -0.95
PCF11-202ENST00000528336 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 DTX1Q86Y01 620 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 DHRS1Q96LJ7 313 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 HSPA12BQ96MM6 686 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 ASPNQ9BXN1 380 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 FAM86C1Q9NVL1 165 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 KCNH3Q9ULD8 1083 aa9.13□□□□□ -0.95
PCF11-202ENST00000528336 A0A1W2PQH9 124 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 H3BS24 57 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 SPINK2P20155 84 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 AOC3Q16853 763 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 TDRD10Q5VZ19 366 aaKnown RBP9.12□□□□□ -0.95
PCF11-202ENST00000528336 VWCEQ96DN2 955 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 FBXL18Q96ME1 805 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 ZNF408Q9H9D4 720 aa9.12□□□□□ -0.95
PCF11-202ENST00000528336 LTBP3Q9NS15 1303 aa9.11□□□□□ -0.95
PCF11-202ENST00000528336 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
PCF11-202ENST00000528336 TP53P04637 393 aaPredicted RBP9.11□□□□□ -0.95
PCF11-202ENST00000528336 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
PCF11-202ENST00000528336 HRASLS5Q96KN8 279 aa9.11□□□□□ -0.95
PCF11-202ENST00000528336 MKRN2Q9H000 416 aaKnown RBP9.11□□□□□ -0.95
PCF11-202ENST00000528336 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
PCF11-202ENST00000528336 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
PCF11-202ENST00000528336 PCDHB10Q9UN67 800 aa9.11□□□□□ -0.95
PCF11-202ENST00000528336 CD96P40200 585 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 ARTNQ5T4W7 220 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
PCF11-202ENST00000528336 PIWIL2Q8TC59 973 aaKnown RBP9.1□□□□□ -0.95
PCF11-202ENST00000528336 UBE2FQ969M7 185 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 PPP1R1BQ9UD71 204 aaPredicted RBP9.1□□□□□ -0.95
PCF11-202ENST00000528336 CCDC39Q9UFE4 941 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 VAV3Q9UKW4 847 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
PCF11-202ENST00000528336 SLC5A6Q9Y289 635 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 SNX11Q9Y5W9 270 aa9.1□□□□□ -0.95
PCF11-202ENST00000528336 C9IYK1 514 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 ADAMTS4O75173 837 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 CLCN7P51798 805 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 PMS1P54277 932 aaKnown RBP9.09□□□□□ -0.95
PCF11-202ENST00000528336 PRKCQQ04759 706 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 GNPTABQ3T906 1256 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 CCDC144CPQ8IYA2 1237 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 BCL7CQ8WUZ0 217 aaPredicted RBP9.09□□□□□ -0.95
PCF11-202ENST00000528336 PRKAG3Q9UGI9 489 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 ST14Q9Y5Y6 855 aa9.09□□□□□ -0.95
PCF11-202ENST00000528336 WASH4PA8MWX3 477 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 CASP7P55210 303 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 NBPF9Q3BBW0 867 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 SPRED2Q7Z698 418 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 PPFIBP1Q86W92 1011 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 MISP3Q96FF7 219 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 DUSP15Q9H1R2 295 aaPredicted RBP9.08□□□□□ -0.96
PCF11-202ENST00000528336 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 SEMA3GQ9NS98 782 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 ZNF214Q9UL59 606 aaPredicted RBP9.08□□□□□ -0.96
PCF11-202ENST00000528336 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
PCF11-202ENST00000528336 WNT11O96014 354 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 PRNPP04156 253 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 GTF2F1P35269 517 aaKnown RBP eCLIP9.07□□□□□ -0.96
PCF11-202ENST00000528336 SNW1Q13573 536 aaKnown RBP9.07□□□□□ -0.96
PCF11-202ENST00000528336 TNNI3KQ59H18 835 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 LARP1BQ659C4 914 aaKnown RBP9.07□□□□□ -0.96
PCF11-202ENST00000528336 ZNF574Q6ZN55 896 aaPredicted RBP9.07□□□□□ -0.96
PCF11-202ENST00000528336 VSIG10LQ86VR7 867 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 FLCNQ8NFG4 579 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
PCF11-202ENST00000528336 ATP13A1Q9HD20 1204 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 ACTR10Q9NZ32 417 aa9.07□□□□□ -0.96
PCF11-202ENST00000528336 R3HCC1Q9Y3T6 440 aaKnown RBP9.07□□□□□ -0.96
PCF11-202ENST00000528336 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 STK10O94804 968 aaKnown RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 AUHQ13825 339 aaKnown RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 CLEC16AQ2KHT3 1053 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 BBS9Q3SYG4 887 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 AXDND1Q5T1B0 1012 aaPredicted RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 DCAF15Q66K64 600 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 ANKS3Q6ZW76 656 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 ASB11Q8WXH4 323 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 DHX38Q92620 1227 aaKnown RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 TRIT1Q9H3H1 467 aaKnown RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
PCF11-202ENST00000528336 GPATCH2Q9NW75 528 aa9.06□□□□□ -0.96
PCF11-202ENST00000528336 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 CD8BP10966 210 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 SLC7A5Q01650 507 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 NMIQ13287 307 aaPredicted RBP9.05□□□□□ -0.96
PCF11-202ENST00000528336 IKZF1Q13422 519 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 TMC3Q7Z5M5 1100 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
PCF11-202ENST00000528336 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
PCF11-202ENST00000528336 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
PCF11-202ENST00000528336 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 VHLLQ6RSH7 139 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 THAP5Q7Z6K1 395 aa9.04□□□□□ -0.96
PCF11-202ENST00000528336 TP53INP2Q8IXH6 220 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms