RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 CXCL11O14625 94 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 DGKZQ13574 1117 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 UBE3CQ15386 1083 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 LAPTM4BQ86VI4 370 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 METTL16Q86W50 562 aaKnown RBP8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 BANK1Q8NDB2 785 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 BRI3BPQ8WY22 251 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 RIOK1Q9BRS2 568 aaKnown RBP8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 ZCCHC17Q9NP64 241 aaKnown RBP8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
PTP4A2-210ENST00000528253 ZFYP08048 801 aaPredicted RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 ASNSP08243 561 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 MX1P20591 662 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 CAP2P40123 477 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 RFC5P40937 340 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 CRHR2Q13324 411 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 TSHZ3Q63HK5 1081 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 PPP2R2DQ66LE6 453 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 CTU1Q7Z7A3 348 aaKnown RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 AMOTL1Q8IY63 956 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 FAM43AQ8N2R8 423 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 KBTBD3Q8NAB2 608 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 R3HDMLQ9H3Y0 253 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 ARMT1Q9H993 441 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 AS3MTQ9HBK9 375 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 ATP8A2Q9NTI2 1148 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 GINM1Q9NU53 330 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 MCM9Q9NXL9 1143 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 SERPINB13Q9UIV8 391 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 AFG3L2Q9Y4W6 797 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 MGAMO43451 1857 aa8.63□□□□□ -1.03
PTP4A2-210ENST00000528253 A6NJR5 290 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 TRIM75PA6NK02 468 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 USP17L5A8MUK1 530 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 BTBD19C9JJ37 291 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 RNF113AO15541 343 aaKnown RBP8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 RAD21O60216 631 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 MBD4O95243 580 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 GCGRP47871 477 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 SP3Q02447 781 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 ARHGEF6Q15052 776 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 PKN2Q16513 984 aaKnown RBP8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 SLC4A8Q2Y0W8 1093 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 GADL1Q6ZQY3 521 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 ANKRD23Q86SG2 305 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 LCORLQ8N3X6 602 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 ZNF280CQ8ND82 737 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 SDR42E1Q8WUS8 393 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 ERO1AQ96HE7 468 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 MCOLN1Q9GZU1 580 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 EHD4Q9H223 541 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
PTP4A2-210ENST00000528253 A0A0G2JLL6 359 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 PDHXO00330 501 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 TLR2O60603 784 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 IGHDP01880 384 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 IRX6P78412 446 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 SPP2Q13103 211 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 CERKLQ49MI3 558 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 TATDN1Q6P1N9 297 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 PRRT2Q7Z6L0 340 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 OTUD7AQ8TE49 926 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 APPBP2Q92624 585 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 FSD1Q9BTV5 496 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 PUS7LQ9H0K6 701 aaKnown RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 DCP1AQ9NPI6 582 aaPredicted RBP8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 DOCK3Q8IZD9 2030 aa8.61□□□□□ -1.03
PTP4A2-210ENST00000528253 DDX60LQ5H9U9 1706 aaKnown RBP8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 C19orf81C9J6K1 198 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 TK2O00142 265 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 PRKAB2O43741 272 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 GDF11O95390 407 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 GNAT2P19087 354 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 PLCD1P51178 756 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 PDE1AP54750 535 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 PABPC4Q13310 644 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 RRP1BQ14684 758 aaKnown RBP8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 KIF22Q14807 665 aa8.6□□□□□ -1.03
PTP4A2-210ENST00000528253 ABCB5Q2M3G0 1257 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms