RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CCDC34Q96HJ3 373 aa13.26□□□□□ -0.29
LINC01001-201ENST00000526704 XDHP47989 1333 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 SEC31AO94979 1220 aaKnown RBP13.25□□□□□ -0.29
LINC01001-201ENST00000526704 BMP15O95972 392 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 TPM1P09493 284 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 EVX2Q03828 476 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 RBL2Q08999 1139 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 ZNF174Q15697 407 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 TTC38Q5R3I4 469 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 RAD9BQ6WBX8 426 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 GSDMAQ96QA5 445 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 CDC5LQ99459 802 aaKnown RBP13.25□□□□□ -0.29
LINC01001-201ENST00000526704 DDAH1O94760 285 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 CCDC175P0C221 793 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 ATP2C1P98194 919 aaPredicted RBP13.25□□□□□ -0.29
LINC01001-201ENST00000526704 E2F4Q16254 413 aa13.25□□□□□ -0.29
LINC01001-201ENST00000526704 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 SEMA3EO15041 775 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 MFAP3LO75121 409 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 CALM1P0DP23 149 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 CALM2P0DP24 149 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 CALM3P0DP25 149 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 SIK1P57059 783 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
LINC01001-201ENST00000526704 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
LINC01001-201ENST00000526704 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01001-201ENST00000526704 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 A0A0U1RQJ8 604 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 PTGDRQ13258 359 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
LINC01001-201ENST00000526704 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
LINC01001-201ENST00000526704 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
LINC01001-201ENST00000526704 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 A0A0G2JS52 829 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 GPR161Q8N6U8 529 aaKnown RBP13.23□□□□□ -0.29
LINC01001-201ENST00000526704 CCDC12Q8WUD4 166 aaPredicted RBP13.23□□□□□ -0.29
LINC01001-201ENST00000526704 STAMQ92783 540 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 ADAMTS3O15072 1205 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 NMT2O60551 498 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 GYPCP04921 128 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
LINC01001-201ENST00000526704 CC2D1AQ6P1N0 951 aaPredicted RBP13.23□□□□□ -0.29
LINC01001-201ENST00000526704 PDXDC2PQ6P474 469 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
LINC01001-201ENST00000526704 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 SASH3O75995 380 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 FECHP22830 423 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 CASP14P31944 242 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 FAM193AP78312 1265 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 IL17AQ16552 155 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
LINC01001-201ENST00000526704 FAM84BQ96KN1 310 aaPredicted RBP13.22□□□□□ -0.29
LINC01001-201ENST00000526704 BLZF1Q9H2G9 400 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 USP17L21D6R901 530 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 ORC4O43929 436 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 COBLO75128 1261 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 RASGRP2Q7LDG7 609 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 RABGGTAQ92696 567 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 MTRQ99707 1265 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 UBXN6Q9BZV1 441 aa13.22□□□□□ -0.29
LINC01001-201ENST00000526704 ATP8B1O43520 1251 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01001-201ENST00000526704 KRT31Q15323 416 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 GOLGA1Q92805 767 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
LINC01001-201ENST00000526704 BSDC1Q9NW68 430 aaPredicted RBP13.21□□□□□ -0.29
LINC01001-201ENST00000526704 NAV1Q8NEY1 1877 aa13.21□□□□□ -0.29
LINC01001-201ENST00000526704 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 SCG2P13521 617 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 VEGFAP15692 232 aaPredicted RBP13.21□□□□□ -0.3
LINC01001-201ENST00000526704 KLRK1P26718 216 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 CCT6AP40227 531 aaKnown RBP13.21□□□□□ -0.3
LINC01001-201ENST00000526704 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 CNGA4Q8IV77 575 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.3
LINC01001-201ENST00000526704 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.3
LINC01001-201ENST00000526704 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.3
LINC01001-201ENST00000526704 CDK5RAP2Q96SN8 1893 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms