RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 DBX2Q6ZNG2 339 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 RETREG2Q8NC44 543 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 KCNH3Q9ULD8 1083 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 OTOL1A6NHN0 477 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 PDE4BQ07343 736 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 SNX17Q15036 470 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 MAP3K11Q16584 847 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 C14orf37Q86TY3 774 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 GGNQ86UU5 652 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 SPPL2CQ8IUH8 684 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 TMEM151BQ8IW70 566 aa5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 SYTL4Q96C24 671 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-219ENST00000526299 SHISA3A0PJX4 238 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 UPK3BL1B0FP48 263 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 UPK3BL2E5RIL1 263 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 EFEMP2O95967 443 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 ATP2B2Q01814 1243 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 TEKQ02763 1124 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 CHRNEQ04844 493 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 CCDC85BQ15834 202 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 PRRT2Q7Z6L0 340 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 CXorf38Q8TB03 319 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 MBD1Q9UIS9 605 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 CORINQ9Y5Q5 1042 aa5.57□□□□□ -1.52
ECHDC1-219ENST00000526299 OR14I1A6ND48 311 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 NOTOA8MTQ0 251 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 SASH1O94885 1247 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 LIG3P49916 1009 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 SRSF3P84103 164 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 NFKB2Q00653 900 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 DUSP4Q13115 394 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 ADGRF1Q5T601 910 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 AGMOQ6ZNB7 445 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 ZSCAN29Q8IWY8 852 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 FEZF2Q8TBJ5 459 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 LINC01599Q8WXQ3 324 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 DACT3Q96B18 629 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 MIR1-1HGQ9H1L0 117 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 ADAM30Q9UKF2 790 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 GNEQ9Y223 722 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 IRAK3Q9Y616 596 aa5.56□□□□□ -1.52
ECHDC1-219ENST00000526299 AFF3P51826 1226 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 EPHB3P54753 998 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 VMACQ2NL98 169 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 FAM13CQ8NE31 585 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 RNF141Q8WVD5 230 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 SIGLEC10Q96LC7 697 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
ECHDC1-219ENST00000526299 RBM47A0AV96 593 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 PLCG1P19174 1290 aa5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 TFE3P19532 575 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 RPL6Q02878 288 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 TSNAXIP1Q2TAA8 658 aa5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 NLRX1Q86UT6 975 aa5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 JARID2Q92833 1246 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 EPB41L4AQ9HCS5 686 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
ECHDC1-219ENST00000526299 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 USP2O75604 605 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 P4HBP07237 508 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 CELA3BP08861 270 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 SYT8Q8NBV8 401 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 ASB16Q96NS5 453 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 CNTD2Q9H8S5 307 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 ZNF281Q9Y2X9 895 aa5.53□□□□□ -1.52
ECHDC1-219ENST00000526299 LDHBP07195 334 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 SDHBP21912 280 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 VIPR1P32241 457 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 TNNI2P48788 182 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 CLEC16AQ2KHT3 1053 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 KREMEN1Q96MU8 473 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 TLR6Q9Y2C9 796 aa5.52□□□□□ -1.53
ECHDC1-219ENST00000526299 N4BP3O15049 544 aa5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 RPL10P27635 214 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 YARSP54577 528 aaKnown RBP5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 TMEFF1Q8IYR6 380 aa5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 FRMD6Q96NE9 622 aa5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 ADAM7Q9H2U9 754 aa5.51□□□□□ -1.53
ECHDC1-219ENST00000526299 HRKO00198 91 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 NRDCO43847 1150 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 ADRB1P08588 477 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 GNA15P30679 374 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 CDR1P51861 262 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 TMEM201Q5SNT2 666 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 USHBP1Q8N6Y0 703 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 ZMYM5Q9UJ78 669 aa5.5□□□□□ -1.53
ECHDC1-219ENST00000526299 CHURC1-FNTBB4DL54 471 aa5.49□□□□□ -1.53
ECHDC1-219ENST00000526299 IRS4O14654 1257 aaPredicted RBP5.49□□□□□ -1.53
ECHDC1-219ENST00000526299 BRD1O95696 1058 aa5.49□□□□□ -1.53
ECHDC1-219ENST00000526299 SLC14A2Q15849 920 aa5.49□□□□□ -1.53
ECHDC1-219ENST00000526299 MEI1Q5TIA1 1274 aa5.49□□□□□ -1.53
ECHDC1-219ENST00000526299 CNKSR3Q6P9H4 555 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms