RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 VWCEQ96DN2 955 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 KREMEN1Q96MU8 473 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 RNF32Q9H0A6 362 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 REV1Q9UBZ9 1251 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 ZNF281Q9Y2X9 895 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 CHURC1-FNTBB4DL54 471 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 ETV2O00321 342 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-210ENST00000525878 DNAJA2O60884 412 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 HTR3BO95264 441 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 ZSCAN22P10073 491 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-210ENST00000525878 GARTP22102 1010 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 TIGD5Q53EQ6 642 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 BAHD1Q8TBE0 780 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-210ENST00000525878 SLC26A8Q96RN1 970 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 ASPNQ9BXN1 380 aa7.73□□□□□ -1.17
CSDE1-210ENST00000525878 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 SORBS3O60504 671 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 KCNA10Q16322 511 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 ATG14Q6ZNE5 492 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 OXR1Q8N573 874 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 CCDC74BQ96LY2 380 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 C19orf44Q9H6X5 657 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 EBF1Q9UH73 591 aa7.72□□□□□ -1.17
CSDE1-210ENST00000525878 SHISA3A0PJX4 238 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 FITM1A5D6W6 292 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 TEKQ02763 1124 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 PWP1Q13610 501 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 MPP2Q14168 576 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 IRF2BP1Q8IU81 584 aa7.71□□□□□ -1.18
CSDE1-210ENST00000525878 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
CSDE1-210ENST00000525878 LTKP29376 864 aa7.7□□□□□ -1.18
CSDE1-210ENST00000525878 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-210ENST00000525878 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
CSDE1-210ENST00000525878 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
CSDE1-210ENST00000525878 LINC01599Q8WXQ3 324 aa7.7□□□□□ -1.18
CSDE1-210ENST00000525878 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
CSDE1-210ENST00000525878 KCNQ5Q9NR82 932 aa7.7□□□□□ -1.18
CSDE1-210ENST00000525878 KLHL3Q9UH77 587 aa7.7□□□□□ -1.18
CSDE1-210ENST00000525878 SMG5Q9UPR3 1016 aaKnown RBP7.7□□□□□ -1.18
CSDE1-210ENST00000525878 GRIN3BO60391 1043 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 TNNI2P48788 182 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 KCNN1Q92952 543 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 SHISA4Q96DD7 197 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 G6PC3Q9BUM1 346 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 SLC6A17Q9H1V8 727 aa7.69□□□□□ -1.18
CSDE1-210ENST00000525878 YBX2Q9Y2T7 364 aaKnown RBP7.69□□□□□ -1.18
CSDE1-210ENST00000525878 MYOCOSA0A1B0GUC4 107 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 TCAF2A6NFQ2 919 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 SNX17Q15036 470 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 FAM196AQ6ZSG2 479 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 ERMP1Q7Z2K6 904 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 SPPL2CQ8IUH8 684 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 GOLM1Q8NBJ4 401 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 ENOX1Q8TC92 643 aaKnown RBP7.68□□□□□ -1.18
CSDE1-210ENST00000525878 KIF2CQ99661 725 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 LRRC3Q9BY71 257 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 RAPGEFL1Q9UHV5 662 aa7.68□□□□□ -1.18
CSDE1-210ENST00000525878 RGS13O14921 159 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 PEX10O60683 326 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 CHRNEQ04844 493 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 FAM160A1Q05DH4 1040 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 SNAP47Q5SQN1 464 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 TTLL10Q6ZVT0 673 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 ANKS4BQ8N8V4 417 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 INTS4Q96HW7 963 aaKnown RBP7.67□□□□□ -1.18
CSDE1-210ENST00000525878 MCOLN1Q9GZU1 580 aa7.67□□□□□ -1.18
CSDE1-210ENST00000525878 SLC22A31A6NKX4 558 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 NOTOA8MTQ0 251 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 MINDY4BA8MYZ0 360 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 LINC00310P59036 64 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 DUSP4Q13115 394 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 PHACTR4Q8IZ21 702 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-210ENST00000525878 HDAC8Q9BY41 377 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 KRTAP4-2Q9BYR5 136 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 ZNF552Q9H707 407 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-210ENST00000525878 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
CSDE1-210ENST00000525878 GREM1O60565 184 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 UBOX5O94941 541 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 ATE1O95260 518 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 NMIQ13287 307 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-210ENST00000525878 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 FBXL19Q6PCT2 694 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 USHBP1Q8N6Y0 703 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 SYTL4Q96C24 671 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-210ENST00000525878 ROBO2Q9HCK4 1378 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
CSDE1-210ENST00000525878 PSPNO60542 156 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 SEMA7AO75326 666 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 ERCC3P19447 782 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 GBP1P32455 592 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 DLG4P78352 724 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 LILRA6Q6PI73 481 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 RNF111Q6ZNA4 994 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 DAGLBQ8NCG7 672 aa7.64□□□□□ -1.19
CSDE1-210ENST00000525878 EFEMP2O95967 443 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms