RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
CTTN-210ENST00000525852 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
CTTN-210ENST00000525852 SH2D4AQ9H788 454 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 VCPKMTQ9H867 229 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
CTTN-210ENST00000525852 CENPFP49454 3210 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 DOCK3Q8IZD9 2030 aa14.58□□□□□ -0.08
CTTN-210ENST00000525852 CYP21A2P08686 494 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 PCP11498 1178 aaKnown RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 OSBPP22059 807 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTTN-210ENST00000525852 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 KIAA1211Q6ZU35 1233 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 RPAP3Q9H6T3 665 aaPredicted RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 MGAMO43451 1857 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 TTLL1O95922 423 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 CATSPERGQ6ZRH7 1159 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 LRRC47Q8N1G4 583 aaKnown RBP14.57□□□□□ -0.08
CTTN-210ENST00000525852 ANKRD13CQ8N6S4 541 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 MKL1Q969V6 931 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 ANO2Q9NQ90 1003 aa14.57□□□□□ -0.08
CTTN-210ENST00000525852 B4E1Z4 1266 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 HERVK_113P62684 666 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
CTTN-210ENST00000525852 CTU1Q7Z7A3 348 aaKnown RBP14.56□□□□□ -0.08
CTTN-210ENST00000525852 TNS4Q8IZW8 715 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 LPAR1Q92633 364 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 MCOLN1Q9GZU1 580 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
CTTN-210ENST00000525852 RAD21O60216 631 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 KDM4AO75164 1064 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 NOVP48745 357 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 OTOP1Q7RTM1 612 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 ESR2Q92731 530 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 ERO1AQ96HE7 468 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
CTTN-210ENST00000525852 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
CTTN-210ENST00000525852 F5H6K3 240 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 NDUFB10O96000 172 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 KLRC3Q07444 240 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 RASGRP2Q7LDG7 609 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 ZKSCAN3Q9BRR0 538 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 TANGO6Q9C0B7 1094 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 ZSWIM5Q9P217 1185 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 STX8Q9UNK0 236 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 A0A0G2JMZ2 1700 aa14.54□□□□□ -0.08
CTTN-210ENST00000525852 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
CTTN-210ENST00000525852 E7EWF7 191 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 SLC27A2O14975 620 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 WDR46O15213 610 aaKnown RBP14.53□□□□□ -0.08
CTTN-210ENST00000525852 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
CTTN-210ENST00000525852 NECTIN1Q15223 517 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 FAM110CQ1W6H9 321 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 FAM83BQ5T0W9 1011 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 RCSD1Q6JBY9 416 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 CHMP4CQ96CF2 233 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 TRIM47Q96LD4 638 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 KRT23Q9C075 422 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 CNNM2Q9H8M5 875 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 RBPJLQ9UBG7 517 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
CTTN-210ENST00000525852 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
CTTN-210ENST00000525852 CNMDO75829 334 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 PSMC4P43686 418 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 CREB3L3Q68CJ9 461 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 CYB5R4Q7L1T6 521 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 PAGR1Q9BTK6 254 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 EFCC1Q9HA90 598 aa14.52□□□□□ -0.08
CTTN-210ENST00000525852 FLOT1O75955 427 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 COG2Q14746 738 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 Q3C1V9 767 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 SLFN13Q68D06 897 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 TMEM47Q9BQJ4 181 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 MORF4L1Q9UBU8 362 aa14.51□□□□□ -0.09
CTTN-210ENST00000525852 TOP1P11387 765 aaKnown RBP14.5□□□□□ -0.09
CTTN-210ENST00000525852 NT5C2P49902 561 aa14.5□□□□□ -0.09
CTTN-210ENST00000525852 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
CTTN-210ENST00000525852 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
CTTN-210ENST00000525852 LBX2Q6XYB7 198 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms