RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 PCGF6Q9BYE7 350 aa8.05□□□□□ -1.12
ATM-208ENST00000525537 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
ATM-208ENST00000525537 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
ATM-208ENST00000525537 FANCGO15287 622 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 AOC2O75106 756 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 PEX14O75381 377 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 FGFR1P11362 822 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 CPEP16870 476 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 AFF1P51825 1210 aaKnown RBP8.04□□□□□ -1.12
ATM-208ENST00000525537 SUMO1P63165 101 aaKnown RBP8.04□□□□□ -1.12
ATM-208ENST00000525537 MAP7Q14244 749 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 TTF1Q15361 905 aaPredicted RBP8.04□□□□□ -1.12
ATM-208ENST00000525537 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 SLC6A19Q695T7 634 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 MRPL41Q8IXM3 137 aaKnown RBP8.04□□□□□ -1.12
ATM-208ENST00000525537 ATL2Q8NHH9 583 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 HAUS7Q99871 368 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 CARD10Q9BWT7 1032 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 LRP2BPQ9P2M1 347 aa8.04□□□□□ -1.12
ATM-208ENST00000525537 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
ATM-208ENST00000525537 LOC100289279A0A1B0GTE1 492 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 TM4SF5O14894 197 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 EPHX1P07099 455 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 SDSP20132 328 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 NFE2Q16621 373 aaPredicted RBP8.03□□□□□ -1.12
ATM-208ENST00000525537 PPM1JQ5JR12 505 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 HEATR6Q6AI08 1181 aaKnown RBP8.03□□□□□ -1.12
ATM-208ENST00000525537 CNNM4Q6P4Q7 775 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 HID1Q8IV36 788 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 PPM1KQ8N3J5 372 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 RIN3Q8TB24 985 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 DDX1Q92499 740 aaKnown RBP8.03□□□□□ -1.12
ATM-208ENST00000525537 KLHL25Q9H0H3 589 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 LRRC4BQ9NT99 713 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
ATM-208ENST00000525537 UBOX5O94941 541 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 EYA4O95677 639 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 CAPNS1P04632 268 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 TP53P04637 393 aaPredicted RBP8.02□□□□□ -1.13
ATM-208ENST00000525537 ITGAVP06756 1048 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 GUCY2FP51841 1108 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 TRIM61Q5EBN2 209 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 GORABQ5T7V8 394 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 TDRD10Q5VZ19 366 aaKnown RBP8.02□□□□□ -1.13
ATM-208ENST00000525537 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
ATM-208ENST00000525537 ZNF227Q86WZ6 799 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 WFDC8Q8IUA0 241 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 CCDC74BQ96LY2 380 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 PICK1Q9NRD5 415 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 FAM86C1Q9NVL1 165 aa8.02□□□□□ -1.13
ATM-208ENST00000525537 C9IYK1 514 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 CBFA2T2O43439 604 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 ALBP02768 609 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 PABPC1P11940 636 aaKnown RBP8.01□□□□□ -1.13
ATM-208ENST00000525537 NLRP12P59046 1061 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 ID3Q02535 119 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 AHI1Q8N157 1196 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 ZNF513Q8N8E2 541 aaPredicted RBP8.01□□□□□ -1.13
ATM-208ENST00000525537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATM-208ENST00000525537 APEX2Q9UBZ4 518 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 SFMBT1Q9UHJ3 866 aa8.01□□□□□ -1.13
ATM-208ENST00000525537 PRODHO43272 600 aa8□□□□□ -1.13
ATM-208ENST00000525537 TSPAN6O43657 245 aa8□□□□□ -1.13
ATM-208ENST00000525537 LILRB5O75023 590 aa8□□□□□ -1.13
ATM-208ENST00000525537 CLEC3AO75596 197 aa8□□□□□ -1.13
ATM-208ENST00000525537 DNAJC8O75937 253 aaPredicted RBP8□□□□□ -1.13
ATM-208ENST00000525537 NPTXRO95502 500 aa8□□□□□ -1.13
ATM-208ENST00000525537 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
ATM-208ENST00000525537 GBP1P32455 592 aa8□□□□□ -1.13
ATM-208ENST00000525537 NTF4P34130 210 aa8□□□□□ -1.13
ATM-208ENST00000525537 SNRPNP63162 240 aaKnown RBP8□□□□□ -1.13
ATM-208ENST00000525537 SETDB1Q15047 1291 aa8□□□□□ -1.13
ATM-208ENST00000525537 AXDND1Q5T1B0 1012 aaPredicted RBP8□□□□□ -1.13
ATM-208ENST00000525537 MSL1Q68DK7 614 aa8□□□□□ -1.13
ATM-208ENST00000525537 NSMFQ6X4W1 530 aa8□□□□□ -1.13
ATM-208ENST00000525537 SLCO4C1Q6ZQN7 724 aa8□□□□□ -1.13
ATM-208ENST00000525537 NECAB2Q7Z6G3 386 aa8□□□□□ -1.13
ATM-208ENST00000525537 STRA8Q7Z7C7 330 aa8□□□□□ -1.13
ATM-208ENST00000525537 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
ATM-208ENST00000525537 MAP4K3Q8IVH8 894 aa8□□□□□ -1.13
ATM-208ENST00000525537 EXOC8Q8IYI6 725 aa8□□□□□ -1.13
ATM-208ENST00000525537 ZNF507Q8TCN5 953 aa8□□□□□ -1.13
ATM-208ENST00000525537 MORC4Q8TE76 937 aa8□□□□□ -1.13
ATM-208ENST00000525537 TSR2Q969E8 191 aaKnown RBP8□□□□□ -1.13
ATM-208ENST00000525537 OSBP2Q969R2 916 aa8□□□□□ -1.13
ATM-208ENST00000525537 PPP1R14AQ96A00 147 aa8□□□□□ -1.13
ATM-208ENST00000525537 TRIM39Q9HCM9 518 aa8□□□□□ -1.13
ATM-208ENST00000525537 FAM83GA6ND36 823 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 KIF3BO15066 747 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 TMPRSS2O15393 492 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 DLGAP3O95886 979 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 ITGB7P26010 798 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 COL8A1P27658 744 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 MCL1Q07820 350 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 CCSAPQ6IQ19 270 aaPredicted RBP7.99□□□□□ -1.13
ATM-208ENST00000525537 GOLGA6L1Q8N7Z2 621 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 GALNT11Q8NCW6 608 aa7.99□□□□□ -1.13
ATM-208ENST00000525537 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms