RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
USP47-206ENST00000525367 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
USP47-206ENST00000525367 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 CNTNAP4Q9C0A0 1308 aa6.9□□□□□ -1.3
USP47-206ENST00000525367 COL17A1Q9UMD9 1497 aaPredicted RBP6.9□□□□□ -1.31
USP47-206ENST00000525367 SUSD5O60279 629 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 LEFTY1O75610 366 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 PMS1P54277 932 aaKnown RBP6.89□□□□□ -1.31
USP47-206ENST00000525367 SLC7A5Q01650 507 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 TCEAL1Q15170 157 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
USP47-206ENST00000525367 MTERF2Q49AM1 385 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 AXDND1Q5T1B0 1012 aaPredicted RBP6.89□□□□□ -1.31
USP47-206ENST00000525367 DCAF15Q66K64 600 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 FAM20CQ8IXL6 584 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 TOP6BLQ8N6T0 577 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 KCNF1Q9H3M0 494 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 SUCOQ9UBS9 1254 aaKnown RBP6.89□□□□□ -1.31
USP47-206ENST00000525367 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
USP47-206ENST00000525367 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
USP47-206ENST00000525367 CLEC3AO75596 197 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 CLSTN1O94985 981 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
USP47-206ENST00000525367 NFKBIBQ15653 356 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 NKAPLQ5M9Q1 402 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 ARTNQ5T4W7 220 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 LETMD1Q6P1Q0 360 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
USP47-206ENST00000525367 SUSD2Q9UGT4 822 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 LEMD3Q9Y2U8 911 aa6.88□□□□□ -1.31
USP47-206ENST00000525367 FAM95CA0A1B0GW59 222 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 GATA4P43694 442 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 UVSSAQ2YD98 709 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 SLC10A6Q3KNW5 377 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 LRP10Q7Z4F1 713 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 MFSD2AQ8NA29 543 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 KREMEN1Q96MU8 473 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 APEX2Q9UBZ4 518 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
USP47-206ENST00000525367 SBNO2Q9Y2G9 1366 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 KDM2BQ8NHM5 1336 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 ESYT3A0FGR9 886 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 SHOXO15266 292 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 LRRN2O75325 713 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 EPHX1P07099 455 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 ADMP35318 185 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 CCNFP41002 786 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 SQSTM1Q13501 440 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 NCAPHQ15003 741 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 EEPD1Q7L9B9 569 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 FGD4Q96M96 766 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 HAUS7Q99871 368 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 YIPF2Q9BWQ6 316 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 MKRN2Q9H000 416 aaKnown RBP6.86□□□□□ -1.31
USP47-206ENST00000525367 ZFP64Q9NPA5 681 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 PRDM10Q9NQV6 1147 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 CEP131Q9UPN4 1083 aa6.86□□□□□ -1.31
USP47-206ENST00000525367 ARID4BQ4LE39 1312 aaPredicted RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 HMX2A2RU54 273 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 EOMESO95936 686 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 IBSPP21815 317 aaPredicted RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 SSRP1Q08945 709 aaKnown RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 MAP7Q14244 749 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 NBPF12Q5TAG4 269 aaPredicted RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 EGFLAMQ63HQ2 1017 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 NOL8Q76FK4 1167 aaKnown RBP6.85□□□□□ -1.31
USP47-206ENST00000525367 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 GATA6Q92908 595 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP47-206ENST00000525367 ZNF451Q9Y4E5 1061 aa6.85□□□□□ -1.31
USP47-206ENST00000525367 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
USP47-206ENST00000525367 ST13P5Q8NFI4 369 aaPredicted RBP6.84□□□□□ -1.31
USP47-206ENST00000525367 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
USP47-206ENST00000525367 KLHL25Q9H0H3 589 aa6.84□□□□□ -1.31
USP47-206ENST00000525367 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
USP47-206ENST00000525367 U3KQE9 123 aa6.84□□□□□ -1.31
USP47-206ENST00000525367 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 TBX1O43435 398 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 IGBP1P78318 339 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 C7orf69Q9H7B7 122 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 MINPP1Q9UNW1 487 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
USP47-206ENST00000525367 PRR33A8MZF0 331 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 ENPP3O14638 875 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 DHX15O43143 795 aaKnown RBP6.82□□□□□ -1.32
USP47-206ENST00000525367 ADCY3O60266 1144 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 MARCH6O60337 910 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 CHMP4BP1P59074 171 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms