RNA–Protein interactions for RNA: ENST00000525083.5

FOXRED1-203, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,228 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-203ENST00000525083 PTPN22Q9Y2R2 807 aa20.75■□□□□ 0.91
FOXRED1-203ENST00000525083 IGKV6D-41A0A0C4DH26 115 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 FAM110CQ1W6H9 321 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 NEDD1Q8NHV4 660 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 RUFY2Q8WXA3 655 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 CEP95Q96GE4 821 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 TANGO6Q9C0B7 1094 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 CLIP2Q9UDT6 1046 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 HPS5Q9UPZ3 1129 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 RAD50Q92878 1312 aa20.74■□□□□ 0.91
FOXRED1-203ENST00000525083 TSPY2A6NKD2 308 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 CCDC85CA6NKD9 419 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 RANBP6O60518 1105 aaKnown RBP20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 FCGRTP55899 365 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 LPAR1Q92633 364 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 PAGR1Q9BTK6 254 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 DSCC1Q9BVC3 393 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 TXNRD2Q9NNW7 524 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
FOXRED1-203ENST00000525083 PLIN4Q96Q06 1357 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 ZNF213O14771 459 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 ORC4O43929 436 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 TBC1D10CQ8IV04 446 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 MTMR4Q9NYA4 1195 aa20.72■□□□□ 0.91
FOXRED1-203ENST00000525083 MGAMO43451 1857 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 GNRH1P01148 92 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 POTEEQ6S8J3 1075 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 RBPJLQ9UBG7 517 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 MORF4L1Q9UBU8 362 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 PTCH2Q9Y6C5 1203 aa20.71■□□□□ 0.91
FOXRED1-203ENST00000525083 TNPO2O14787 897 aaKnown RBP20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 WDR46O15213 610 aaKnown RBP20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 NMT2O60551 498 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 TTLL1O95922 423 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 FGRP09769 529 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 BMP2KLQ5H9B9 411 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 AKNAD1Q5T1N1 836 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 LRRC47Q8N1G4 583 aaKnown RBP20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 GPRC5AQ8NFJ5 357 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 GTF3C2Q8WUA4 911 aaPredicted RBP20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
FOXRED1-203ENST00000525083 LAMA4Q16363 1823 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 SPDYE16A6NNV3 312 aaPredicted RBP20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 F5H6K3 240 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 SGSM2O43147 1006 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 FLOT1O75955 427 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 HOXD10P28358 340 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 KLRC3Q07444 240 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 COG2Q14746 738 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 IMMTQ16891 758 aaKnown RBP20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 SRRDQ9UH36 339 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 CTNNA3Q9UI47 895 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 STX8Q9UNK0 236 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 MYPNQ86TC9 1320 aa20.69■□□□□ 0.9
FOXRED1-203ENST00000525083 NDUFB10O96000 172 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 ERVK-9P63128 1117 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 ERVK-24P63145 666 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 PTH1RQ03431 593 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 PRKCZQ05513 592 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 Q3C1V9 767 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 ERICH6BQ5W0A0 696 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 MKL1Q969V6 931 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 NUP88Q99567 741 aaPredicted RBP20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 GABRQQ9UN88 632 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 NEDD4P46934 1319 aa20.68■□□□□ 0.9
FOXRED1-203ENST00000525083 CNMDO75829 334 aa20.67■□□□□ 0.9
FOXRED1-203ENST00000525083 PRMT2P55345 433 aa20.67■□□□□ 0.9
FOXRED1-203ENST00000525083 NKX2-3Q8TAU0 364 aa20.67■□□□□ 0.9
FOXRED1-203ENST00000525083 HOXC10Q9NYD6 342 aa20.67■□□□□ 0.9
FOXRED1-203ENST00000525083 RABGAP1Q9Y3P9 1069 aa20.67■□□□□ 0.9
FOXRED1-203ENST00000525083 HTTP42858 3142 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 DSG3P32926 999 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 LBX2Q6XYB7 198 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 CCAR1Q8IX12 1150 aaKnown RBP20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 RAET1EQ8TD07 263 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 COA7Q96BR5 231 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 CHMP4CQ96CF2 233 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 FBXO28Q9NVF7 368 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 BTBD7Q9P203 1132 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 RLFQ13129 1914 aa20.66■□□□□ 0.9
FOXRED1-203ENST00000525083 SLC9C1Q4G0N8 1177 aa20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 PPP4R3BQ5MIZ7 849 aa20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 ESR2Q92731 530 aa20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 ATG4CQ96DT6 458 aa20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 PORCNQ9H237 461 aa20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 ISY1Q9ULR0 285 aaKnown RBP20.65■□□□□ 0.9
FOXRED1-203ENST00000525083 FLT3LGP49771 235 aa20.64■□□□□ 0.89
FOXRED1-203ENST00000525083 SLFN13Q68D06 897 aa20.64■□□□□ 0.89
FOXRED1-203ENST00000525083 GMCL1P1Q8NEA9 526 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms