RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ARHGEF10LQ9HCE6 1279 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 GPCPD1Q9NPB8 672 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 AGTPBP1Q9UPW5 1226 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TMX2Q9Y320 296 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 SNX14Q9Y5W7 946 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TNKSO95271 1327 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TESPA1A2RU30 521 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 UNCXA6NJT0 531 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 C19orf81C9J6K1 198 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 F5H6K3 240 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 PRC1O43663 620 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 PPFIA3O75145 1194 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 REC8O95072 547 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TTLL1O95922 423 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 FGRP09769 529 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 HSPA8P11142 646 aaKnown RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 RXRAP19793 462 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 HSPA4P34932 840 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 IRX3P78415 501 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 KLRC3Q07444 240 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TRDNQ13061 729 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 IKQ13123 557 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 CCDC96Q2M329 555 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 SLFN13Q68D06 897 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TTBK2Q6IQ55 1244 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 NOL8Q76FK4 1167 aaKnown RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 FASTKD5Q7L8L6 764 aaKnown RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ANKRD23Q86SG2 305 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 CCDC144CPQ8IYA2 1237 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 MB21D2Q8IYB1 491 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ANKRD13CQ8N6S4 541 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ENAHQ8N8S7 591 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 PIBF1Q8WXW3 757 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 KIFC2Q96AC6 838 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ATG4CQ96DT6 458 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 NEK1Q96PY6 1258 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ZSCAN10Q96SZ4 725 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TMEM47Q9BQJ4 181 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 UBAC1Q9BSL1 405 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 UPF3BQ9BZI7 483 aaKnown RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 KRT23Q9C075 422 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ARHGAP39Q9C0H5 1083 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 KIAA1683Q9H0B3 1180 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 ASCC2Q9H1I8 757 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 VCPKMTQ9H867 229 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TXNRD2Q9NNW7 524 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 NYAP2Q9P242 653 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 TAOK2Q9UL54 1235 aa5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 NAP1L2Q9ULW6 460 aaPredicted RBP5.42□□□□□ -1.54
CHMP4A-202ENST00000524955 CEP350Q5VT06 3117 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 DOCK1Q14185 1865 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 TMEM232C9JQI7 657 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 GPR25O00155 361 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CA12O43570 354 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 FLOT1O75955 427 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 TOP1P11387 765 aaKnown RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 ZKSCAN1P17029 563 aaPredicted RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CASTP20810 708 aaKnown RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 OSBPP22059 807 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CTGFP29279 349 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 USP14P54578 494 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 INHBEP58166 350 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 PLS1Q14651 629 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 SEC23AQ15436 765 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 Q3C1V9 767 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 TMEM67Q5HYA8 995 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 RNF20Q5VTR2 975 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 OTUD7BQ6GQQ9 843 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 NFXL1Q6ZNB6 911 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CATSPERGQ6ZRH7 1159 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 IQCA1Q86XH1 822 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 STAG2Q8N3U4 1231 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 PROCA1Q8NCQ7 364 aaPredicted RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CD99L2Q8TCZ2 262 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 IGDCC4Q8TDY8 1250 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 SMCR8Q8TEV9 937 aaPredicted RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 NUP133Q8WUM0 1156 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 ZNF296Q8WUU4 475 aaPredicted RBP5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 UBA5Q9GZZ9 404 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 KAT14Q9H8E8 782 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 CNNM2Q9H8M5 875 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 ZFYVE28Q9HCC9 887 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 GOPCQ9HD26 462 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 LAMB1P07942 1786 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 PLIN4Q96Q06 1357 aa5.41□□□□□ -1.54
CHMP4A-202ENST00000524955 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 ERICH2A1L162 156 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 SPDYE16A6NNV3 312 aaPredicted RBP5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L15C9J2P7 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L13C9JLJ4 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L11C9JVI0 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L18D6R9N7 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L22D6RA61 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L17D6RBQ6 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L19D6RCP7 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L20D6RJB6 530 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms