RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 P4HBP07237 508 aaKnown RBP9.67□□□□□ -0.86
NEDD8-203ENST00000524927 EHHADHQ08426 723 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
NEDD8-203ENST00000524927 SLCO4C1Q6ZQN7 724 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 FBXO33Q7Z6M2 555 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 CMTR1Q8N1G2 835 aaKnown RBP9.67□□□□□ -0.86
NEDD8-203ENST00000524927 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
NEDD8-203ENST00000524927 BCL11AQ9H165 835 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 CRISPLD1Q9H336 500 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 DMGDHQ9UI17 866 aaKnown RBP9.67□□□□□ -0.86
NEDD8-203ENST00000524927 COL4A5P29400 1685 aa9.67□□□□□ -0.86
NEDD8-203ENST00000524927 MRC1P22897 1456 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 NEURL1BA8MQ27 555 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 GPR182O15218 404 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 EPXP11678 715 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 TAGLNQ01995 201 aaKnown RBP9.66□□□□□ -0.86
NEDD8-203ENST00000524927 LRIT3Q3SXY7 679 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 ALYREFQ86V81 257 aaKnown RBP9.66□□□□□ -0.86
NEDD8-203ENST00000524927 MRRFQ96E11 262 aaKnown RBP9.66□□□□□ -0.86
NEDD8-203ENST00000524927 HTATIP2Q9BUP3 242 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 USP20Q9Y2K6 914 aa9.66□□□□□ -0.86
NEDD8-203ENST00000524927 LAMA2P24043 3122 aaKnown RBP9.65□□□□□ -0.86
NEDD8-203ENST00000524927 TONSLQ96HA7 1378 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 NPR1P16066 1061 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 AMPD1P23109 780 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 DGKGP49619 791 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 ST5P78524 1137 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 DSC3Q14574 896 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 SLC4A8Q2Y0W8 1093 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-203ENST00000524927 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
NEDD8-203ENST00000524927 FNDC3AQ9Y2H6 1198 aaKnown RBP9.65□□□□□ -0.86
NEDD8-203ENST00000524927 TJP1Q07157 1748 aa9.65□□□□□ -0.87
NEDD8-203ENST00000524927 NCAPD2Q15021 1401 aa9.65□□□□□ -0.87
NEDD8-203ENST00000524927 SNED1Q8TER0 1413 aa9.65□□□□□ -0.87
NEDD8-203ENST00000524927 WASHC2AQ641Q2 1341 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 A6NHS1 94 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 WTIPA6NIX2 430 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-203ENST00000524927 EPB42P16452 691 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 INPP5BP32019 993 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 DLK2Q6UY11 383 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 CNBD1Q8NA66 436 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 ALKBH8Q96BT7 664 aaKnown RBP9.64□□□□□ -0.87
NEDD8-203ENST00000524927 COG3Q96JB2 828 aa9.64□□□□□ -0.87
NEDD8-203ENST00000524927 IGHA2P01877 340 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 NEFLP07196 543 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 FBLN1P23142 703 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 BMP8BP34820 402 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 GMPSP49915 693 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-203ENST00000524927 FKBP1BP68106 108 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 ATP2B2Q01814 1243 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 SREBF2Q12772 1141 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 TBC1D9BQ66K14 1250 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 NIM1KQ8IY84 436 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 TRPM4Q8TD43 1214 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 ERO1AQ96HE7 468 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 R3HDMLQ9H3Y0 253 aa9.63□□□□□ -0.87
NEDD8-203ENST00000524927 NPHP1O15259 732 aa9.62□□□□□ -0.87
NEDD8-203ENST00000524927 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
NEDD8-203ENST00000524927 HSP90AB1P08238 724 aaKnown RBP9.62□□□□□ -0.87
NEDD8-203ENST00000524927 FGD1P98174 961 aa9.62□□□□□ -0.87
NEDD8-203ENST00000524927 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
NEDD8-203ENST00000524927 ANKRD26Q9UPS8 1709 aa9.62□□□□□ -0.87
NEDD8-203ENST00000524927 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
NEDD8-203ENST00000524927 KLRG2A4D1S0 409 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-203ENST00000524927 GNB5O14775 395 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 ARAFP10398 606 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 ALDH1B1P30837 517 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 CABP4P57796 275 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 TYRO3Q06418 890 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 GUCD1Q96NT3 240 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 P2RX7Q99572 595 aaKnown RBP9.61□□□□□ -0.87
NEDD8-203ENST00000524927 BRD7Q9NPI1 651 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 STAP2Q9UGK3 403 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 PCDHGC4Q9Y5F7 938 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 ZNF609O15014 1411 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 KIF24Q5T7B8 1368 aa9.61□□□□□ -0.87
NEDD8-203ENST00000524927 A0A087WZG4 1122 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-203ENST00000524927 CXCL9Q07325 125 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 RRS1Q15050 365 aaKnown RBP9.6□□□□□ -0.87
NEDD8-203ENST00000524927 SLC9C1Q4G0N8 1177 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-203ENST00000524927 FIGNL1Q6PIW4 674 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 CHSY3Q70JA7 882 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 ZNF438Q7Z4V0 828 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 EFCC1Q9HA90 598 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 TERF2IPQ9NYB0 399 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms