RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 FHOD1Q9Y613 1164 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 SNAP23O00161 211 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 ORC4O43929 436 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 ZRANB2O95218 330 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD7-202ENST00000524602 PBX1P40424 430 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 GNG11P61952 73 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 ATP2C1P98194 919 aaPredicted RBP9.44□□□□□ -0.9
CHD7-202ENST00000524602 APTXQ7Z2E3 356 aaKnown RBP9.44□□□□□ -0.9
CHD7-202ENST00000524602 ADGRA1Q86SQ6 560 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 DHX58Q96C10 678 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 MED15Q96RN5 788 aa9.44□□□□□ -0.9
CHD7-202ENST00000524602 SAMSN1Q9NSI8 373 aaKnown RBP9.44□□□□□ -0.9
CHD7-202ENST00000524602 BSDC1Q9NW68 430 aaPredicted RBP9.44□□□□□ -0.9
CHD7-202ENST00000524602 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 MYH13Q9UKX3 1938 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 KCNQ4P56696 695 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 TROAPQ12815 778 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 JAKMIP3Q5VZ66 844 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 PTF1AQ7RTS3 328 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 ANKRD18AQ8IVF6 992 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 GRAMD1CQ8IYS0 662 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 CMTR1Q8N1G2 835 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 SDR42E1Q8WUS8 393 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 KIFC2Q96AC6 838 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 ADD3Q9UEY8 706 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 FANCGO15287 622 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 FECHP22830 423 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 SF3B3Q15393 1217 aaKnown RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 TOGARAM2Q6ZUX3 1019 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 CNGA4Q8IV77 575 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 SMARCC1Q92922 1105 aaPredicted RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 CARD6Q9BX69 1037 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 COL1A1P02452 1464 aaPredicted RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 PNMA6AP0CW24 399 aaPredicted RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 SPAG1Q07617 926 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 GOLGA8FQ08AF8 430 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 GOLGA8DPQ0D2H9 430 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 USP49Q70CQ1 688 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 RABGGTAQ92696 567 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 SHISA4Q96DD7 197 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 ABCF2Q9UG63 623 aa9.43□□□□□ -0.9
CHD7-202ENST00000524602 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
CHD7-202ENST00000524602 A0A087X0B3 334 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 PPP2R3AQ06190 1150 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 TRIM14Q14142 442 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 RSRC2Q7L4I2 434 aaKnown RBP9.42□□□□□ -0.9
CHD7-202ENST00000524602 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
CHD7-202ENST00000524602 IGSF22Q8N9C0 903 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
CHD7-202ENST00000524602 EPSTI1Q96J88 318 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHD7-202ENST00000524602 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 PPP1R3GB7ZBB8 358 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 NPHP1O15259 732 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
CHD7-202ENST00000524602 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 WDR24Q96S15 920 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 BTAF1O14981 1849 aa9.42□□□□□ -0.9
CHD7-202ENST00000524602 LRRC10BA6NIK2 292 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 NPY5RQ15761 445 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 HSP90AA4PQ58FG1 418 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 ATP8A2Q9NTI2 1148 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 LIMA1Q9UHB6 759 aaKnown RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 USP21Q9UK80 565 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 CCDC88AQ3V6T2 1871 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 MFAP3LO75121 409 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 PLEKHA8P1O95397 391 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 CALML3P27482 149 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 E2F4Q16254 413 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 RASGRP2Q7LDG7 609 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 FAM177A1Q8N128 213 aaPredicted RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 ANKRD20A12PQ8NF67 263 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 RWDD2AQ9UIY3 292 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 SCG2P13521 617 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
CHD7-202ENST00000524602 AFMP43652 599 aa9.41□□□□□ -0.9
CHD7-202ENST00000524602 GYG1P46976 350 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms