RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 PLEKHH3Q7Z736 793 aa22.53■■□□□ 1.2
CTSB-206ENST00000524500 SIAH1Q8IUQ4 282 aa22.53■■□□□ 1.2
CTSB-206ENST00000524500 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
CTSB-206ENST00000524500 SEC62Q99442 399 aaKnown RBP22.53■■□□□ 1.2
CTSB-206ENST00000524500 VCPKMTQ9H867 229 aa22.53■■□□□ 1.2
CTSB-206ENST00000524500 MKI67P46013 3256 aaKnown RBP22.53■■□□□ 1.2
CTSB-206ENST00000524500 PDE4DIPQ5VU43 2346 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 SPDYE16A6NNV3 312 aaPredicted RBP22.52■■□□□ 1.2
CTSB-206ENST00000524500 CYP2B6P20813 491 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 POTEEQ6S8J3 1075 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 GPR142Q7Z601 462 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 CLEC10AQ8IUN9 316 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 IFNL3Q8IZI9 196 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 STK11IPQ8N1F8 1099 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 PORCNQ9H237 461 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 EPB41L4AQ9HCS5 686 aaPredicted RBP22.52■■□□□ 1.2
CTSB-206ENST00000524500 MYH8P13535 1937 aa22.52■■□□□ 1.2
CTSB-206ENST00000524500 ROBO3Q96MS0 1386 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 CNMDO75829 334 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 XRCC5P13010 732 aaKnown RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 EEF2P13639 858 aaKnown RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 CAPN2P17655 700 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 WDR78Q5VTH9 848 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 SMC5Q8IY18 1101 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 TRMT44Q8IYL2 757 aaKnown RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 ZNF444Q8N0Y2 327 aaPredicted RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 U2AF1L4Q8WU68 220 aaKnown RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 NAPBQ9H115 298 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
CTSB-206ENST00000524500 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
CTSB-206ENST00000524500 WDR46O15213 610 aaKnown RBP22.5■■□□□ 1.19
CTSB-206ENST00000524500 SLC3A2P08195 630 aaKnown RBP22.5■■□□□ 1.19
CTSB-206ENST00000524500 RASA1P20936 1047 aa22.5■■□□□ 1.19
CTSB-206ENST00000524500 RGS2P41220 211 aa22.5■■□□□ 1.19
CTSB-206ENST00000524500 B4GALNT3Q6L9W6 998 aa22.5■■□□□ 1.19
CTSB-206ENST00000524500 SHISA4Q96DD7 197 aa22.5■■□□□ 1.19
CTSB-206ENST00000524500 FLOT1O75955 427 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 SGPL1O95470 568 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 KIAA1755Q5JYT7 1200 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 MB21D1Q8N884 522 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 BTBD7Q9P203 1132 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 IVNS1ABPQ9Y6Y0 642 aa22.49■■□□□ 1.19
CTSB-206ENST00000524500 DOCK3Q8IZD9 2030 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 RAD21O60216 631 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 PDE4BQ07343 736 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 MORN1Q5T089 497 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 DEFB118Q96PH6 123 aa22.48■■□□□ 1.19
CTSB-206ENST00000524500 PAK6Q9NQU5 681 aaPredicted RBP22.48■■□□□ 1.19
CTSB-206ENST00000524500 IGHDP01880 384 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 TFRCP02786 760 aaKnown RBP22.47■■□□□ 1.19
CTSB-206ENST00000524500 ZKSCAN1P17029 563 aaPredicted RBP22.47■■□□□ 1.19
CTSB-206ENST00000524500 DSG3P32926 999 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 TRIB2Q92519 343 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 USP6NLQ92738 828 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 APBA2Q99767 749 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
CTSB-206ENST00000524500 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.47■■□□□ 1.191e-7■■■□□ 17.4
CTSB-206ENST00000524500 HMX1Q9NP08 348 aaPredicted RBP22.47■■□□□ 1.19
CTSB-206ENST00000524500 HELLSQ9NRZ9 838 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 NYAP2Q9P242 653 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 RPTORQ8N122 1335 aa22.47■■□□□ 1.19
CTSB-206ENST00000524500 SLC15A5A6NIM6 579 aa22.46■■□□□ 1.19
CTSB-206ENST00000524500 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
CTSB-206ENST00000524500 NUCB1Q02818 461 aa22.46■■□□□ 1.19
CTSB-206ENST00000524500 MAP2K5Q13163 448 aa22.46■■□□□ 1.19
CTSB-206ENST00000524500 SAMD1Q6SPF0 538 aaPredicted RBP22.46■■□□□ 1.19
CTSB-206ENST00000524500 PRDM1O75626 825 aa22.45■■□□□ 1.18
CTSB-206ENST00000524500 PTPREP23469 700 aa22.45■■□□□ 1.18
CTSB-206ENST00000524500 PPARAQ07869 468 aa22.45■■□□□ 1.18
CTSB-206ENST00000524500 CCDC129Q6ZRS4 1044 aa22.45■■□□□ 1.18
CTSB-206ENST00000524500 SPATC1LQ9H0A9 340 aa22.45■■□□□ 1.18
CTSB-206ENST00000524500 FARP2O94887 1054 aaPredicted RBP22.44■■□□□ 1.18
CTSB-206ENST00000524500 TRIM32Q13049 653 aa22.44■■□□□ 1.18
CTSB-206ENST00000524500 PLS1Q14651 629 aa22.44■■□□□ 1.18
CTSB-206ENST00000524500 SHCBP1Q8NEM2 672 aa22.44■■□□□ 1.18
CTSB-206ENST00000524500 RILPL2Q969X0 211 aa22.44■■□□□ 1.18
CTSB-206ENST00000524500 MOV10L1Q9BXT6 1211 aaKnown RBP22.44■■□□□ 1.18
CTSB-206ENST00000524500 STRNO43815 780 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 TSPY3P0CV98 308 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 TSPY8P0CW00 308 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 PRKAR2AP13861 404 aaKnown RBP22.43■■□□□ 1.18
CTSB-206ENST00000524500 GRB14Q14449 540 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 MCMDC2Q4G0Z9 681 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 ATG4CQ96DT6 458 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 HTATIP2Q9BUP3 242 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 CRISPLD2Q9H0B8 497 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 CLIP2Q9UDT6 1046 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 PLXNB2O15031 1838 aa22.43■■□□□ 1.18
CTSB-206ENST00000524500 FAM83BQ5T0W9 1011 aa22.42■■□□□ 1.18
CTSB-206ENST00000524500 MAP3K21Q5TCX8 1036 aa22.42■■□□□ 1.18
CTSB-206ENST00000524500 UBE2Q1Q7Z7E8 422 aa22.42■■□□□ 1.18
CTSB-206ENST00000524500 MROH8Q9H579 483 aa22.42■■□□□ 1.18
CTSB-206ENST00000524500 IGKV6D-41A0A0C4DH26 115 aa22.41■■□□□ 1.18
CTSB-206ENST00000524500 F5H6K3 240 aa22.41■■□□□ 1.18
CTSB-206ENST00000524500 TTLL1O95922 423 aa22.41■■□□□ 1.18
CTSB-206ENST00000524500 ERCC3P19447 782 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms