RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 GMIPQ9P107 970 aa5.08□□□□□ -1.6
CSMD1-214ENST00000524177 TACC3Q9Y6A5 838 aa5.08□□□□□ -1.6
CSMD1-214ENST00000524177 FARP2O94887 1054 aaPredicted RBP5.07□□□□□ -1.6
CSMD1-214ENST00000524177 RING1Q06587 406 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 BNIP3Q12983 259 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 ZYXQ15942 572 aaKnown RBP5.07□□□□□ -1.6
CSMD1-214ENST00000524177 LRRFIP1Q32MZ4 808 aaKnown RBP5.07□□□□□ -1.6
CSMD1-214ENST00000524177 ZC3H12AQ5D1E8 599 aaKnown RBP5.07□□□□□ -1.6
CSMD1-214ENST00000524177 AKAP4Q5JQC9 854 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 TMEM201Q5SNT2 666 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 C6orf15Q6UXA7 325 aaPredicted RBP5.07□□□□□ -1.6
CSMD1-214ENST00000524177 ELMO3Q96BJ8 720 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 GPATCH3Q96I76 525 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 FAM105AQ9NUU6 356 aa5.07□□□□□ -1.6
CSMD1-214ENST00000524177 PRAMEF27A3QJZ7 478 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 TNFRSF10CO14798 259 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 PPM1GO15355 546 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-214ENST00000524177 AOC2O75106 756 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 NME1P15531 152 aaKnown RBP5.06□□□□□ -1.6
CSMD1-214ENST00000524177 PLCG1P19174 1290 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 GRK4P32298 578 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 NTF4P34130 210 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-214ENST00000524177 SQSTM1Q13501 440 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 PLEKHG4Q58EX7 1191 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 NLRC3Q7RTR2 1065 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 C12orf40Q86WS4 652 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 FAM168AQ92567 244 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 ACSF2Q96CM8 615 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-214ENST00000524177 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 ACSS3Q9H6R3 686 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 LGR6Q9HBX8 967 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 C1GALT1Q9NS00 363 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 ADAM30Q9UKF2 790 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 AP4E1Q9UPM8 1137 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 CSADQ9Y600 493 aa5.06□□□□□ -1.6
CSMD1-214ENST00000524177 LTBP3Q9NS15 1303 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-214ENST00000524177 ESYT3A0FGR9 886 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 TMPRSS2O15393 492 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 DYNC1LI2O43237 492 aaPredicted RBP5.05□□□□□ -1.6
CSMD1-214ENST00000524177 DIAPH1O60610 1272 aaKnown RBP5.05□□□□□ -1.6
CSMD1-214ENST00000524177 DDAH1O94760 285 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 PGRP06401 933 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 PDE4BQ07343 736 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 PKN1Q16512 942 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 MTERF2Q49AM1 385 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 PPM1JQ5JR12 505 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 CDCP2Q5VXM1 449 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 SEZ6L2Q6UXD5 910 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 UNC5AQ6ZN44 842 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 FAM178BQ8IXR5 827 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 STK11IPQ8N1F8 1099 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 JMYQ8N9B5 988 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 SLC9A7Q96T83 725 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 CNNM2Q9H8M5 875 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 RC3H2Q9HBD1 1191 aaKnown RBP5.05□□□□□ -1.6
CSMD1-214ENST00000524177 FANCLQ9NW38 375 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 DAGLAQ9Y4D2 1042 aa5.05□□□□□ -1.6
CSMD1-214ENST00000524177 SYNGAP1Q96PV0 1343 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 CHURC1-FNTBB4DL54 471 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 CDC45O75419 566 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 CDK11BP21127 795 aaKnown RBP5.04□□□□□ -1.6
CSMD1-214ENST00000524177 POLR2BP30876 1174 aaKnown RBP5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ASPAP45381 313 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ERVK-24P63145 666 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 HNRNPUQ00839 825 aaKnown RBP eCLIP5.04□□□□□ -1.6
CSMD1-214ENST00000524177 C2orf27AQ580R0 203 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ARSHQ5FYA8 562 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ZBTB37Q5TC79 503 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 OGFOD3Q6PK18 319 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 SPATC1Q76KD6 591 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ATG4DQ86TL0 474 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-214ENST00000524177 KSR1Q8IVT5 923 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 ANKRD13AQ8IZ07 590 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 KLHL6Q8WZ60 621 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 WNT10AQ9GZT5 417 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 RAD18Q9NS91 495 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 TMEM260Q9NX78 707 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 TJP2Q9UDY2 1190 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 PPP1R9AQ9ULJ8 1098 aa5.04□□□□□ -1.6
CSMD1-214ENST00000524177 FAM86C2PA6NEL3 165 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 RNASE1P07998 156 aaKnown RBP5.03□□□□□ -1.6
CSMD1-214ENST00000524177 CD8BP10966 210 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 FUT4P22083 530 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 ETF1P62495 437 aaKnown RBP5.03□□□□□ -1.6
CSMD1-214ENST00000524177 ID3Q02535 119 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 MLECQ14165 292 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 INTS3Q68E01 1043 aaKnown RBP5.03□□□□□ -1.6
CSMD1-214ENST00000524177 UBE3DQ7Z6J8 389 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 PLD6Q8N2A8 252 aaKnown RBP5.03□□□□□ -1.6
CSMD1-214ENST00000524177 ST13P5Q8NFI4 369 aaPredicted RBP5.03□□□□□ -1.6
CSMD1-214ENST00000524177 FBRSQ9HAH7 460 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 CRIM1Q9NZV1 1036 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 PFDN2Q9UHV9 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms