RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 TOX2Q96NM4 488 aa12.18□□□□□ -0.46
NDRG1-228ENST00000523931 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
NDRG1-228ENST00000523931 GBF1Q92538 1859 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 GPR75-ASB3A0A0A6YYF3 556 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L15C9J2P7 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L13C9JLJ4 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L11C9JVI0 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L18D6R9N7 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L22D6RA61 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L17D6RBQ6 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L19D6RCP7 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L20D6RJB6 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 PI4K2BG5E9Z4 385 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 APBB1O00213 710 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 TLL1O43897 1013 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 RARBP10826 455 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 ADORA2AP29274 412 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L24Q0WX57 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 PRAMEF19Q5SWL8 479 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
NDRG1-228ENST00000523931 USP17L2Q6R6M4 530 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 ANKRD33Q7Z3H0 272 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 RNF180Q86T96 592 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 MEIS3Q99687 375 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
NDRG1-228ENST00000523931 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 COG5Q9UP83 839 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 YBX2Q9Y2T7 364 aaKnown RBP12.17□□□□□ -0.46
NDRG1-228ENST00000523931 SPTBN4Q9H254 2564 aa12.17□□□□□ -0.46
NDRG1-228ENST00000523931 EYA2O00167 538 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
NDRG1-228ENST00000523931 ACRP10323 421 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 CSF2RAP15509 400 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 PHKA1P46020 1223 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 JAG1P78504 1218 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 TMEM199Q8N511 208 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 FEZ1Q99689 392 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
NDRG1-228ENST00000523931 GDF11O95390 407 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 PGK1P00558 417 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 RLBP1P12271 317 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 ZYXQ15942 572 aaKnown RBP12.15□□□□□ -0.46
NDRG1-228ENST00000523931 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
NDRG1-228ENST00000523931 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
NDRG1-228ENST00000523931 STRNO43815 780 aa12.14□□□□□ -0.47
NDRG1-228ENST00000523931 MAP4K4O95819 1239 aaPredicted RBP12.14□□□□□ -0.47
NDRG1-228ENST00000523931 GNAI2P04899 355 aa12.14□□□□□ -0.47
NDRG1-228ENST00000523931 MECOMQ03112 1051 aa12.14□□□□□ -0.47
NDRG1-228ENST00000523931 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
NDRG1-228ENST00000523931 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
NDRG1-228ENST00000523931 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
NDRG1-228ENST00000523931 COBLO75128 1261 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 CATSPERGQ6ZRH7 1159 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 HLA-CQ95604 372 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
NDRG1-228ENST00000523931 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 SIPA1L1O43166 1804 aa12.13□□□□□ -0.47
NDRG1-228ENST00000523931 MROH7Q68CQ1 1323 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 LDHCP07864 332 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 ACLYP53396 1101 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 RABGGTBP53611 331 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 GSTO1P78417 241 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
NDRG1-228ENST00000523931 CD320Q9NPF0 282 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 ZNF318Q5VUA4 2279 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
NDRG1-228ENST00000523931 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
NDRG1-228ENST00000523931 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
NDRG1-228ENST00000523931 FGBP02675 491 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 MYOGP15173 224 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 VCAM1P19320 739 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 ADORA1P30542 326 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
NDRG1-228ENST00000523931 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
NDRG1-228ENST00000523931 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
NDRG1-228ENST00000523931 TSEN34Q9BSV6 310 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms