RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 CPLX3Q8WVH0 158 aa6□□□□□ -1.45
PCM1-220ENST00000523896 TMEM40Q8WWA1 233 aa6□□□□□ -1.45
PCM1-220ENST00000523896 FAM168AQ92567 244 aa6□□□□□ -1.45
PCM1-220ENST00000523896 UBXN4Q92575 508 aa6□□□□□ -1.45
PCM1-220ENST00000523896 MBNL3Q9NUK0 354 aaKnown RBP6□□□□□ -1.45
PCM1-220ENST00000523896 GMIPQ9P107 970 aa6□□□□□ -1.45
PCM1-220ENST00000523896 TJP2Q9UDY2 1190 aa6□□□□□ -1.45
PCM1-220ENST00000523896 DNAJA2O60884 412 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 CBX7O95931 251 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 CST3P01034 146 aaPredicted RBP5.99□□□□□ -1.45
PCM1-220ENST00000523896 ETV3P41162 512 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 NKG7Q16617 165 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 NKPD1Q17RQ9 610 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 SLC6A19Q695T7 634 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 LSRQ86X29 649 aaPredicted RBP5.99□□□□□ -1.45
PCM1-220ENST00000523896 WFDC3Q8IUB2 231 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 MCATQ8IVS2 390 aaKnown RBP5.99□□□□□ -1.45
PCM1-220ENST00000523896 CCDC120Q96HB5 630 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 CRBNQ96SW2 442 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
PCM1-220ENST00000523896 SLC22A31A6NKX4 558 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 KIR3DL1P43629 444 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 CDCP2Q5VXM1 449 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 FBXW10Q5XX13 1052 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 OVOS1Q6IE37 1185 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 C22orf34Q6ZV56 151 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 SLFN12Q8IYM2 578 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
PCM1-220ENST00000523896 FAM13CQ8NE31 585 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 TMEM87BQ96K49 555 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 ZNF408Q9H9D4 720 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 LMCD1Q9NZU5 365 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 USP35Q9P2H5 1018 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 ADAMTS6Q9UKP5 1117 aa5.98□□□□□ -1.45
PCM1-220ENST00000523896 H3BS24 57 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 IGSF3O75054 1194 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 STK10O94804 968 aaKnown RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 ZNF865P0CJ78 1059 aaPredicted RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 GTF2F1P35269 517 aaKnown RBP eCLIP5.97□□□□□ -1.45
PCM1-220ENST00000523896 YARSP54577 528 aaKnown RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 CHMP4BP1P59074 171 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 PKN1Q16512 942 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 POU5F2Q8N7G0 328 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 C19orf47Q8N9M1 422 aaKnown RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 DHX38Q92620 1227 aaKnown RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 ANAPC16Q96DE5 110 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 ATG4CQ96DT6 458 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 TM9SF2Q99805 663 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 HIRIP3Q9BW71 556 aaPredicted RBP5.97□□□□□ -1.45
PCM1-220ENST00000523896 ANTXR1Q9H6X2 564 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 PRDM7Q9NQW5 492 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 PRKAG3Q9UGI9 489 aa5.97□□□□□ -1.45
PCM1-220ENST00000523896 CHURC1-FNTBB4DL54 471 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 TNFRSF10CO14798 259 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 NME1P15531 152 aaKnown RBP5.96□□□□□ -1.46
PCM1-220ENST00000523896 ETFBP38117 255 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 AFMP43652 599 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 RBL2Q08999 1139 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 KCNMB1Q16558 191 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 TNNI3KQ59H18 835 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 THAP5Q7Z6K1 395 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 ZSWIM9Q86XI8 627 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 FAM169BQ8N8A8 192 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 FLAD1Q8NFF5 587 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 SLC38A3Q99624 504 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 DPH2Q9BQC3 489 aaPredicted RBP5.96□□□□□ -1.46
PCM1-220ENST00000523896 CARS2Q9HA77 564 aaKnown RBP5.96□□□□□ -1.46
PCM1-220ENST00000523896 PPP1R1BQ9UD71 204 aaPredicted RBP5.96□□□□□ -1.46
PCM1-220ENST00000523896 MRVI1Q9Y6F6 885 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 CAPN6Q9Y6Q1 641 aa5.96□□□□□ -1.46
PCM1-220ENST00000523896 PRR33A8MZF0 331 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 UPK3BL1B0FP48 263 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 UPK3BL2E5RIL1 263 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 FARP2O94887 1054 aaPredicted RBP5.95□□□□□ -1.46
PCM1-220ENST00000523896 GUCY2CP25092 1073 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 CASP7P55210 303 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 ARSHQ5FYA8 562 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 INTS3Q68E01 1043 aaKnown RBP5.95□□□□□ -1.46
PCM1-220ENST00000523896 CDH24Q86UP0 819 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 CYB5D2Q8WUJ1 264 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 ATP13A1Q9HD20 1204 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 FAM53CQ9NYF3 392 aa5.95□□□□□ -1.46
PCM1-220ENST00000523896 SMAD7O15105 426 aaKnown RBP5.94□□□□□ -1.46
PCM1-220ENST00000523896 RAG1P15918 1043 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 CCNFP41002 786 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 NBPF6Q5VWK0 638 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 RUFY4Q6ZNE9 571 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
PCM1-220ENST00000523896 NBPF4Q96M43 638 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 TRIT1Q9H3H1 467 aaKnown RBP5.94□□□□□ -1.46
PCM1-220ENST00000523896 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 KCNH3Q9ULD8 1083 aa5.94□□□□□ -1.46
PCM1-220ENST00000523896 RGS13O14921 159 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms