RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.83	■□□□□ 0.6
CDK16-222	ENST00000523699		A0A1W2PPC1	479 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699		A0A1W2PRG0	241 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	USP17L12	C9JPN9	530 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	USP17L21	D6R901	530 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	SMARCA5	O60264	1052 aa	Predicted RBP	18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	AKR1B1	P15121	316 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	ATP2B2	Q01814	1243 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	GRB14	Q14449	540 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	C12orf60	Q5U649	245 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	POTEE	Q6S8J3	1075 aa		18.82	■□□□□ 0.6
CDK16-222	ENST00000523699	FLOT1	O75955	427 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	CCND3	P30281	292 aa	Predicted RBP	18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	CDK8	P49336	464 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	SLFNL1	Q499Z3	407 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	C16orf86	Q6ZW13	317 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	VCPKMT	Q9H867	229 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	TMX2	Q9Y320	296 aa		18.81	■□□□□ 0.6
CDK16-222	ENST00000523699	WDR46	O15213	610 aa	Known RBP	18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	MSC	O60682	206 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	HOXC6	P09630	235 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	DPP9	Q86TI2	863 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	SHCBP1	Q8NEM2	672 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	SPATC1L	Q9H0A9	340 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	SLC5A4	Q9NY91	659 aa		18.8	■□□□□ 0.6
CDK16-222	ENST00000523699	CYP2D7	A0A087X1C5	515 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	STRN	O43815	780 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	PLS1	Q14651	629 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	CLEC10A	Q8IUN9	316 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	SPICE1	Q8N0Z3	855 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	KBTBD3	Q8NAB2	608 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	PUS7L	Q9H0K6	701 aa	Known RBP	18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	PRO3102	Q9H379	93 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	MROH8	Q9H579	483 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	KANSL2	Q9H9L4	492 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	GOPC	Q9HD26	462 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	PLXNB2	O15031	1838 aa		18.79	■□□□□ 0.6
CDK16-222	ENST00000523699	ZFY	P08048	801 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK16-222	ENST00000523699	CNGA1	P29973	690 aa		18.78	■□□□□ 0.6
CDK16-222	ENST00000523699	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.78	■□□□□ 0.6
CDK16-222	ENST00000523699	DCTPP1	Q9H773	170 aa		18.78	■□□□□ 0.6
CDK16-222	ENST00000523699	RAD21	O60216	631 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	CHGB	P05060	677 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	ERCC3	P19447	782 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	ADORA2A	P29274	412 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	DSG3	P32926	999 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	MNX1	P50219	401 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	CTR9	Q6PD62	1173 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	NCAPG2	Q86XI2	1143 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	APPBP2	Q92624	585 aa		18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	DDX20	Q9UHI6	824 aa	Known RBP	18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK16-222	ENST00000523699	EEF2	P13639	858 aa	Known RBP	18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	GNAT2	P19087	354 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	CYP2C19	P33261	490 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	OLFML2B	Q68BL8	750 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	LHX8	Q68G74	356 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	GIMAP6	Q6P9H5	292 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	ATG4C	Q96DT6	458 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	MKNK2	Q9HBH9	465 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	ZNF287	Q9HBT7	754 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	FLRT1	Q9NZU1	646 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	STAP2	Q9UGK3	403 aa		18.76	■□□□□ 0.59
CDK16-222	ENST00000523699	PFAS	O15067	1338 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	ERC2	O15083	957 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	RNF113A	O15541	343 aa	Known RBP	18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	SLC25A27	O95847	323 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	COL6A1	P12109	1028 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	TDO2	P48775	406 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	KIAA1755	Q5JYT7	1200 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	ABRA	Q8N0Z2	381 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	NPLOC4	Q8TAT6	608 aa		18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	STRBP	Q96SI9	672 aa	Known RBP	18.75	■□□□□ 0.59
CDK16-222	ENST00000523699	FCER1A	P12319	257 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	COPB2	P35606	906 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	SBK1	Q52WX2	424 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	TSHZ3	Q63HK5	1081 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	SIAH1	Q8IUQ4	282 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.74	■□□□□ 0.59
CDK16-222	ENST00000523699		A0A0G2JMZ2	1700 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	TTC41P	Q6P2S7	1318 aa		18.74	■□□□□ 0.59
CDK16-222	ENST00000523699	ROBO3	Q96MS0	1386 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	ZNF236	Q9UL36	1845 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	MINDY4B	A8MYZ0	360 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	GPAA1	O43292	621 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	APP	P05067	770 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	SYN1	P17600	705 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	GDF15	Q99988	308 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	NACAP1	Q9BZK3	213 aa		18.73	■□□□□ 0.59
CDK16-222	ENST00000523699	CEP290	O15078	2479 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	SMIM22	K7EJ46	135 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	DNM1L	O00429	736 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	CYBA	P13498	195 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	BMP8B	P34820	402 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	KCTD2	Q14681	263 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	OSBP2	Q969R2	916 aa		18.72	■□□□□ 0.59
CDK16-222	ENST00000523699	GSG1L2	A8MUP6	293 aa		18.71	■□□□□ 0.59
CDK16-222	ENST00000523699	TMEM132B	Q14DG7	1078 aa		18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms