RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 MTF1Q14872 753 aa20.31■□□□□ 0.84
IKBKB-228ENST00000523517 TMCO3Q6UWJ1 677 aa20.31■□□□□ 0.84
IKBKB-228ENST00000523517 SMYD4Q8IYR2 804 aaPredicted RBP20.31■□□□□ 0.84
IKBKB-228ENST00000523517 CTAGE1Q96RT6 745 aa20.31■□□□□ 0.84
IKBKB-228ENST00000523517 ORC4O43929 436 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 CCDC175P0C221 793 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 PNMA6AP0CW24 399 aaPredicted RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 CLEC4GQ6UXB4 293 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 MRPL44Q9H9J2 332 aaKnown RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 KAT6BQ8WYB5 2073 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 PHLPP1O60346 1717 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 SOWAHDA6NJG2 315 aa20.3■□□□□ 0.84
IKBKB-228ENST00000523517 KARSQ15046 597 aaKnown RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 NAA15Q9BXJ9 866 aaKnown RBP20.3■□□□□ 0.84
IKBKB-228ENST00000523517 EVX2Q03828 476 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 PPP2R3AQ06190 1150 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 FILIP1LQ4L180 1135 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 FBXO33Q7Z6M2 555 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 NSUN4Q96CB9 384 aaKnown RBP20.29■□□□□ 0.84
IKBKB-228ENST00000523517 NMT2O60551 498 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 E2F4Q16254 413 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 IQUBQ8NA54 791 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 ST7Q9NRC1 585 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 XDHP47989 1333 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 SPATA31A1Q5TZJ5 1347 aa20.29■□□□□ 0.84
IKBKB-228ENST00000523517 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 TRAPPC10P48553 1259 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 NLRP5P59047 1200 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 RAD9BQ6WBX8 426 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 CPLX3Q8WVH0 158 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 STAMQ92783 540 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 ADGRG1Q9Y653 693 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 RREB1Q92766 1687 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 SCG2P13521 617 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 MECOMQ03112 1051 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 PIK3AP1Q6ZUJ8 805 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
IKBKB-228ENST00000523517 CTNND2Q9UQB3 1225 aa20.28■□□□□ 0.84
IKBKB-228ENST00000523517 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
IKBKB-228ENST00000523517 LAMB2P55268 1798 aa20.27■□□□□ 0.84
IKBKB-228ENST00000523517 MFAP3LO75121 409 aa20.27■□□□□ 0.84
IKBKB-228ENST00000523517 PYM1Q9BRP8 204 aaKnown RBP20.27■□□□□ 0.84
IKBKB-228ENST00000523517 CRNKL1Q9BZJ0 848 aaKnown RBP20.27■□□□□ 0.84
IKBKB-228ENST00000523517 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
IKBKB-228ENST00000523517 PLA2G4AP47712 749 aa20.27■□□□□ 0.83
IKBKB-228ENST00000523517 PDXDC2PQ6P474 469 aa20.27■□□□□ 0.83
IKBKB-228ENST00000523517 RSRC2Q7L4I2 434 aaKnown RBP20.27■□□□□ 0.83
IKBKB-228ENST00000523517 GPR161Q8N6U8 529 aaKnown RBP20.27■□□□□ 0.83
IKBKB-228ENST00000523517 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.83
IKBKB-228ENST00000523517 COL16A1Q07092 1604 aaPredicted RBP20.26■□□□□ 0.83
IKBKB-228ENST00000523517 IL17AQ16552 155 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
IKBKB-228ENST00000523517 CCDC12Q8WUD4 166 aaPredicted RBP20.26■□□□□ 0.83
IKBKB-228ENST00000523517 EPC1Q9H2F5 836 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 ITIH6Q6UXX5 1313 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 KLRK1P26718 216 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 MCM7P33993 719 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 IRX2Q9BZI1 471 aaPredicted RBP20.26■□□□□ 0.83
IKBKB-228ENST00000523517 LZTFL1Q9NQ48 299 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 ATP8A2Q9NTI2 1148 aa20.26■□□□□ 0.83
IKBKB-228ENST00000523517 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
IKBKB-228ENST00000523517 CYP2D6P10635 497 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 CASP14P31944 242 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 RRAGBQ5VZM2 374 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
IKBKB-228ENST00000523517 CCDC51Q96ER9 411 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 MTRQ99707 1265 aa20.25■□□□□ 0.83
IKBKB-228ENST00000523517 LIMA1Q9UHB6 759 aaKnown RBP20.25■□□□□ 0.83
IKBKB-228ENST00000523517 ADAMTS3O15072 1205 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 GYPCP04921 128 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 VEGFAP15692 232 aaPredicted RBP20.24■□□□□ 0.83
IKBKB-228ENST00000523517 CNGA4Q8IV77 575 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 RWDD2AQ9UIY3 292 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 PDS5AQ29RF7 1337 aaKnown RBP20.24■□□□□ 0.83
IKBKB-228ENST00000523517 LRRC10BA6NIK2 292 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 ATP8B1O43520 1251 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 COBLO75128 1261 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 FAM193AP78312 1265 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 KRT31Q15323 416 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 SLC10A5Q5PT55 438 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 RASGRP2Q7LDG7 609 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 RABGGTAQ92696 567 aa20.24■□□□□ 0.83
IKBKB-228ENST00000523517 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
IKBKB-228ENST00000523517 SEC31AO94979 1220 aaKnown RBP20.23■□□□□ 0.83
IKBKB-228ENST00000523517 FECHP22830 423 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
IKBKB-228ENST00000523517 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
IKBKB-228ENST00000523517 SBK1Q52WX2 424 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 KIF5CO60282 957 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 HIBADHP31937 336 aaKnown RBP20.23■□□□□ 0.83
IKBKB-228ENST00000523517 CCT6AP40227 531 aaKnown RBP20.23■□□□□ 0.83
IKBKB-228ENST00000523517 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 GOLGA1Q92805 767 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
IKBKB-228ENST00000523517 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms