RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
CPNE3-206ENST00000523469 SPACA3Q8IXA5 215 aa9.33□□□□□ -0.92
CPNE3-206ENST00000523469 Q96M66 194 aa9.33□□□□□ -0.92
CPNE3-206ENST00000523469 A0A1W2PQH9 124 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 FAM86C2PA6NEL3 165 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 SPINK2P20155 84 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 ETFBP38117 255 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 CLCN7P51798 805 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 LRP8Q14114 963 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 ZYXQ15942 572 aaKnown RBP9.32□□□□□ -0.92
CPNE3-206ENST00000523469 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 ZNF408Q9H9D4 720 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 SUCOQ9UBS9 1254 aaKnown RBP9.32□□□□□ -0.92
CPNE3-206ENST00000523469 PRKAG3Q9UGI9 489 aa9.32□□□□□ -0.92
CPNE3-206ENST00000523469 PRNPP04156 253 aa9.31□□□□□ -0.92
CPNE3-206ENST00000523469 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
CPNE3-206ENST00000523469 TNK2Q07912 1038 aa9.31□□□□□ -0.92
CPNE3-206ENST00000523469 SF3A1Q15459 793 aaKnown RBP9.31□□□□□ -0.92
CPNE3-206ENST00000523469 DTWD2Q8NBA8 298 aa9.31□□□□□ -0.92
CPNE3-206ENST00000523469 SMAD7O15105 426 aaKnown RBP9.3□□□□□ -0.92
CPNE3-206ENST00000523469 PMS1P54277 932 aaKnown RBP9.3□□□□□ -0.92
CPNE3-206ENST00000523469 BBS9Q3SYG4 887 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 HRASLS5Q96KN8 279 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
CPNE3-206ENST00000523469 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 VAV3Q9UKW4 847 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 ST14Q9Y5Y6 855 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 LTBP3Q9NS15 1303 aa9.3□□□□□ -0.92
CPNE3-206ENST00000523469 LRRN2O75325 713 aa9.29□□□□□ -0.92
CPNE3-206ENST00000523469 PRKCQQ04759 706 aa9.29□□□□□ -0.92
CPNE3-206ENST00000523469 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
CPNE3-206ENST00000523469 HSPA12BQ96MM6 686 aa9.29□□□□□ -0.92
CPNE3-206ENST00000523469 ZNF214Q9UL59 606 aaPredicted RBP9.29□□□□□ -0.92
CPNE3-206ENST00000523469 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
CPNE3-206ENST00000523469 HYAL3O43820 417 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-206ENST00000523469 CDKAL1Q5VV42 579 aa9.28□□□□□ -0.92
CPNE3-206ENST00000523469 THAP5Q7Z6K1 395 aa9.28□□□□□ -0.92
CPNE3-206ENST00000523469 VSIG10LQ86VR7 867 aa9.28□□□□□ -0.92
CPNE3-206ENST00000523469 SREK1Q8WXA9 508 aaKnown RBP9.28□□□□□ -0.92
CPNE3-206ENST00000523469 ZNF512BQ96KM6 892 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-206ENST00000523469 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
CPNE3-206ENST00000523469 ACTR10Q9NZ32 417 aa9.28□□□□□ -0.92
CPNE3-206ENST00000523469 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 RANGAP1P46060 587 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-206ENST00000523469 NBPF9Q3BBW0 867 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 ARTNQ5T4W7 220 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-206ENST00000523469 ASB11Q8WXH4 323 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 ARMC5Q96C12 935 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 GPR62Q9BZJ7 368 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 TRIT1Q9H3H1 467 aaKnown RBP9.27□□□□□ -0.93
CPNE3-206ENST00000523469 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 SLC5A6Q9Y289 635 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
CPNE3-206ENST00000523469 UNC13AQ9UPW8 1703 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 STK10O94804 968 aaKnown RBP9.26□□□□□ -0.93
CPNE3-206ENST00000523469 AOC3Q16853 763 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 PPFIBP1Q86W92 1011 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 CCDC144CPQ8IYA2 1237 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 SEMA3GQ9NS98 782 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
CPNE3-206ENST00000523469 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
CPNE3-206ENST00000523469 R3HCC1Q9Y3T6 440 aaKnown RBP9.26□□□□□ -0.93
CPNE3-206ENST00000523469 C9IYK1 514 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 H3BS24 57 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 SRFP11831 508 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 SLC7A5Q01650 507 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 GNPTABQ3T906 1256 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 ANKS3Q6ZW76 656 aa9.25□□□□□ -0.93
CPNE3-206ENST00000523469 ASCC2Q9H1I8 757 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-206ENST00000523469 DUSP15Q9H1R2 295 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-206ENST00000523469 GTF2F1P35269 517 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPNE3-206ENST00000523469 BNIP3Q12983 259 aa9.24□□□□□ -0.93
CPNE3-206ENST00000523469 AUHQ13825 339 aaKnown RBP9.24□□□□□ -0.93
CPNE3-206ENST00000523469 ANKRD39Q53RE8 183 aa9.24□□□□□ -0.93
CPNE3-206ENST00000523469 TDRD10Q5VZ19 366 aaKnown RBP9.24□□□□□ -0.93
CPNE3-206ENST00000523469 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
CPNE3-206ENST00000523469 ENOX1Q8TC92 643 aaKnown RBP9.24□□□□□ -0.93
CPNE3-206ENST00000523469 ZFP64Q9NPA5 681 aa9.24□□□□□ -0.93
CPNE3-206ENST00000523469 PCDHB12Q9Y5F1 795 aa9.24□□□□□ -0.93
CPNE3-206ENST00000523469 WNT11O96014 354 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 TP53P04637 393 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-206ENST00000523469 NMIQ13287 307 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-206ENST00000523469 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-206ENST00000523469 VHLLQ6RSH7 139 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 CKAP2LQ8IYA6 745 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 UBE2FQ969M7 185 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 ZSWIM5Q9P217 1185 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 FBXL21Q9UKT6 434 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 PCDHB10Q9UN67 800 aa9.23□□□□□ -0.93
CPNE3-206ENST00000523469 KLF4O43474 513 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 NCAPHQ15003 741 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 FXNQ16595 210 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 CLEC16AQ2KHT3 1053 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 LARP1BQ659C4 914 aaKnown RBP9.22□□□□□ -0.93
CPNE3-206ENST00000523469 TSPYL5Q86VY4 417 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-206ENST00000523469 FLCNQ8NFG4 579 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms