RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TRIM10Q9UDY6 481 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TBX22Q9Y458 520 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 SRPRBQ9Y5M8 271 aaKnown RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 CEMIPQ8WUJ3 1361 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TMEM131LA2VDJ0 1609 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 A0A0U1RQJ8 604 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 ANTXR2P58335 489 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 RNASE9P60153 205 aaKnown RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 GRIN1Q05586 938 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TBX2Q13207 712 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 PTPAQ15257 358 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TTLL7Q6ZT98 887 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 USP49Q70CQ1 688 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 AMOTL1Q8IY63 956 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 MIGA1Q8NAN2 632 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 ESR2Q92731 530 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 PAGE5Q96GU1 130 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 MMS19Q96T76 1030 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 TSGA10Q9BZW7 698 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 FOXP1Q9H334 677 aaPredicted RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 YY1AP1Q9H869 796 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 GEMIN8Q9NWZ8 242 aaKnown RBP10.11□□□□□ -0.79
CSMD1-212ENST00000523387 PALLDQ8WX93 1383 aa10.11□□□□□ -0.79
CSMD1-212ENST00000523387 IFFO1Q0D2I5 559 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 TICAM2Q86XR7 235 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 TBC1D10CQ8IV04 446 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 ADD3Q9UEY8 706 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 HPCAL4Q9UM19 191 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 CLTCQ00610 1675 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 E7EVH7 732 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 FMNL1O95466 1100 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 A1BGP04217 495 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 ATP1A1P05023 1023 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 USP5P45974 858 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 RFX5P48382 616 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 CYP27A1Q02318 531 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 IFIT1BQ5T764 474 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 TMEM139Q8IV31 216 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 ARFGAP2Q8N6H7 521 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 TEX13AQ9BXU3 409 aaPredicted RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 INCENPQ9NQS7 918 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 EXOC1Q9NV70 894 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 UTYO14607 1347 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 UBN2Q6ZU65 1347 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 PRDM1O75626 825 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 SLC7A5Q01650 507 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 PIK3AP1Q6ZUJ8 805 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 CHP1Q99653 195 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 NOC4LQ9BVI4 516 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 IFIH1Q9BYX4 1025 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 VIPAS39Q9H9C1 493 aa10.1□□□□□ -0.79
CSMD1-212ENST00000523387 PPANQ9NQ55 473 aaKnown RBP10.1□□□□□ -0.79
CSMD1-212ENST00000523387 GYPCP04921 128 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 IFNAR1P17181 557 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 ASIC1P78348 528 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 AKNAD1Q5T1N1 836 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 ANKARQ7Z5J8 1434 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 PARP1P09874 1014 aaKnown RBP10.09□□□□□ -0.79
CSMD1-212ENST00000523387 CEP85LQ5SZL2 805 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 IFT20Q8IY31 132 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 ZNF654Q8IZM8 581 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-212ENST00000523387 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-212ENST00000523387 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-212ENST00000523387 SLC5A1P13866 664 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 ZNF18P17022 549 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 CXCR5P32302 372 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 IRAK1P51617 712 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 IFT88Q13099 833 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 TAX1BP1Q86VP1 789 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 ANKRD13CQ8N6S4 541 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 FANCBQ8NB91 859 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 TRIM58Q8NG06 486 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 TRMT112Q9UI30 125 aaKnown RBP10.09□□□□□ -0.79
CSMD1-212ENST00000523387 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
CSMD1-212ENST00000523387 UBE2Q2LH0YL09 131 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 H7C1D1 291 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 PDE6AP16499 860 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 PTGDRQ13258 359 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 NAA25Q14CX7 972 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 RABL6Q3YEC7 729 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-212ENST00000523387 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 CXorf56Q9H5V9 222 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 ZSWIM5Q9P217 1185 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 DENND2AQ9ULE3 1009 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 IQSEC3Q9UPP2 1182 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-212ENST00000523387 NCAPD2Q15021 1401 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 SEMA3EO15041 775 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 FANCGO15287 622 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 BMP6P22004 513 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 MAGEA1P43355 309 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 PAK2Q13177 524 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms