RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GBF1Q92538 1859 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 PGK1P00558 417 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 RARBP10826 455 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 IL15P40933 162 aaPredicted RBP17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 TIMM10P62072 90 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 RNF180Q86T96 592 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 FEZ1Q99689 392 aa17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 MOV10L1Q9BXT6 1211 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-202ENST00000523261 TRANK1O15050 2925 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 FAM86C2PA6NEL3 165 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 GH2P01242 217 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 TRIM34Q9BYJ4 488 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 SLC28A3Q9HAS3 691 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 CDK5RAP2Q96SN8 1893 aa17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 PRRC2BQ5JSZ5 2229 aaKnown RBP17.15■□□□□ 0.34
NKX3-1-202ENST00000523261 LRRC37A2A6NM11 1700 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 CSF2RAP15509 400 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 MRE11P49959 708 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 USP14P54578 494 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 PSRC1Q6PGN9 363 aaPredicted RBP17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 MAPKAPK5Q8IW41 473 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 HERVK_113Q902F9 699 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 KIAA1683Q9H0B3 1180 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 FLT1P17948 1338 aa17.14■□□□□ 0.33
NKX3-1-202ENST00000523261 FOCADQ5VW36 1801 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 ACRP10323 421 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 ERCC3P19447 782 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 TGFBRAP1Q8WUH2 860 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 XAGE2Q96GT9 111 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 STARD7Q9NQZ5 370 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 NRBP1Q9UHY1 535 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 ROBO3Q96MS0 1386 aa17.13■□□□□ 0.33
NKX3-1-202ENST00000523261 TLL1O43897 1013 aa17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 ADAMTS4O75173 837 aa17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 SKIV2LQ15477 1246 aaKnown RBP17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 TSEN34Q9BSV6 310 aaKnown RBP17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 A0A0G2JMZ2 1700 aa17.12■□□□□ 0.33
NKX3-1-202ENST00000523261 A0A1B0GUL7 405 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 ACLYP53396 1101 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 ABRAQ8N0Z2 381 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 NOL10Q9BSC4 688 aaKnown RBP17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
NKX3-1-202ENST00000523261 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
NKX3-1-202ENST00000523261 PLCG2P16885 1265 aa17.1■□□□□ 0.33
NKX3-1-202ENST00000523261 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
NKX3-1-202ENST00000523261 PPP4CP60510 307 aa17.1■□□□□ 0.33
NKX3-1-202ENST00000523261 LENG1Q96BZ8 264 aaPredicted RBP17.1■□□□□ 0.33
NKX3-1-202ENST00000523261 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 BAG3O95817 575 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 HLA-DOAP06340 250 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 POU3F3P20264 500 aaPredicted RBP17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 CDK7P50613 346 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 RAB3GAP1Q15042 981 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 MROH8Q9H579 483 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 IL23AQ9NPF7 189 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 SAP30BPQ9UHR5 308 aaKnown RBP17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 COG5Q9UP83 839 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
NKX3-1-202ENST00000523261 PTPRCP08575 1304 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 COG2Q14746 738 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 PPP2R2DQ66LE6 453 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 KLHDC9Q8NEP7 349 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 HOXC10Q9NYD6 342 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 MTCH2Q9Y6C9 303 aa17.08■□□□□ 0.32
NKX3-1-202ENST00000523261 SYNRGQ9UMZ2 1314 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms