RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CNMDO75829 334 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 COG2Q14746 738 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 GPR142Q7Z601 462 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 PLEKHH3Q7Z736 793 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 SIAH1Q8IUQ4 282 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 U2AF1L4Q8WU68 220 aaKnown RBP19.41■□□□□ 0.7
CLN8-206ENST00000523237 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
CLN8-206ENST00000523237 HOXC10Q9NYD6 342 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 STAP2Q9UGK3 403 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 ROBO3Q96MS0 1386 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 RLFQ13129 1914 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 PARP14Q460N5 1801 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 SGPL1O95470 568 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 XRCC5P13010 732 aaKnown RBP19.4■□□□□ 0.7
CLN8-206ENST00000523237 CAPN2P17655 700 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 CYP2B6P20813 491 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 ZMYM1Q5SVZ6 1142 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 VCPKMTQ9H867 229 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 MKNK2Q9HBH9 465 aa19.4■□□□□ 0.7
CLN8-206ENST00000523237 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
CLN8-206ENST00000523237 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.7
CLN8-206ENST00000523237 EEF2P13639 858 aaKnown RBP19.39■□□□□ 0.69
CLN8-206ENST00000523237 PDE1AP54750 535 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 ATP2B2Q01814 1243 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 TRMT44Q8IYL2 757 aaKnown RBP19.39■□□□□ 0.69
CLN8-206ENST00000523237 IFNL3Q8IZI9 196 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 SPICE1Q8N0Z3 855 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 EVI5LQ96CN4 794 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 SEC62Q99442 399 aaKnown RBP19.39■□□□□ 0.69
CLN8-206ENST00000523237 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 PAK6Q9NQU5 681 aaPredicted RBP19.39■□□□□ 0.69
CLN8-206ENST00000523237 BTBD7Q9P203 1132 aa19.39■□□□□ 0.69
CLN8-206ENST00000523237 WDR46O15213 610 aaKnown RBP19.38■□□□□ 0.69
CLN8-206ENST00000523237 RASA1P20936 1047 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 RGS2P41220 211 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 KIAA1755Q5JYT7 1200 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 MORN1Q5T089 497 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 WDR78Q5VTH9 848 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 TRIB2Q92519 343 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 DEFB118Q96PH6 123 aa19.38■□□□□ 0.69
CLN8-206ENST00000523237 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLN8-206ENST00000523237 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 RPTORQ8N122 1335 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 FLOT1O75955 427 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
CLN8-206ENST00000523237 SMC5Q8IY18 1101 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 USP6NLQ92738 828 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 APBA2Q99767 749 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 GOPCQ9HD26 462 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 HMX1Q9NP08 348 aaPredicted RBP19.37■□□□□ 0.69
CLN8-206ENST00000523237 IVNS1ABPQ9Y6Y0 642 aa19.37■□□□□ 0.69
CLN8-206ENST00000523237 ZKSCAN1P17029 563 aaPredicted RBP19.36■□□□□ 0.69
CLN8-206ENST00000523237 DSG3P32926 999 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 MAP2K5Q13163 448 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 EXOC6Q8TAG9 804 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLN8-206ENST00000523237 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 NAPBQ9H115 298 aa19.36■□□□□ 0.69
CLN8-206ENST00000523237 COL11A1P12107 1806 aaPredicted RBP19.35■□□□□ 0.69
CLN8-206ENST00000523237 SLC15A5A6NIM6 579 aa19.35■□□□□ 0.69
CLN8-206ENST00000523237 FARP2O94887 1054 aaPredicted RBP19.35■□□□□ 0.69
CLN8-206ENST00000523237 SLC3A2P08195 630 aaKnown RBP19.35■□□□□ 0.69
CLN8-206ENST00000523237 TRIM32Q13049 653 aa19.35■□□□□ 0.69
CLN8-206ENST00000523237 UBE2Q1Q7Z7E8 422 aa19.35■□□□□ 0.69
CLN8-206ENST00000523237 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
CLN8-206ENST00000523237 RAD21O60216 631 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 PTPREP23469 700 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 PDE4BQ07343 736 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 TICAM2Q86XR7 235 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 HTATIP2Q9BUP3 242 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 MOV10L1Q9BXT6 1211 aaKnown RBP19.34■□□□□ 0.69
CLN8-206ENST00000523237 SPATC1LQ9H0A9 340 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
CLN8-206ENST00000523237 ZNF236Q9UL36 1845 aa19.34■□□□□ 0.69
CLN8-206ENST00000523237 PRDM1O75626 825 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 IGHDP01880 384 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 PRKAR2AP13861 404 aaKnown RBP19.33■□□□□ 0.68
CLN8-206ENST00000523237 GRB14Q14449 540 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 MAP3K21Q5TCX8 1036 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 SAMD1Q6SPF0 538 aaPredicted RBP19.33■□□□□ 0.68
CLN8-206ENST00000523237 CCDC129Q6ZRS4 1044 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 SHCBP1Q8NEM2 672 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 ATG4CQ96DT6 458 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 HELLSQ9NRZ9 838 aa19.33■□□□□ 0.68
CLN8-206ENST00000523237 STRNO43815 780 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 PPARAQ07869 468 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 PLS1Q14651 629 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 CCL14Q16627 93 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 DPF3Q92784 378 aa19.32■□□□□ 0.68
CLN8-206ENST00000523237 IGKV6D-41A0A0C4DH26 115 aa19.31■□□□□ 0.68
CLN8-206ENST00000523237 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
CLN8-206ENST00000523237 HOXC6P09630 235 aa19.31■□□□□ 0.68
CLN8-206ENST00000523237 ERCC3P19447 782 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms