RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 HMGCRP04035 888 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
VEGFA-223ENST00000523125 CYP2B6P20813 491 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 ICA1Q05084 483 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 TRIB2Q92519 343 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 DEFB118Q96PH6 123 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 STAP2Q9UGK3 403 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 FRMPD3Q5JV73 1810 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 CEP290O15078 2479 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 ROBO3Q96MS0 1386 aa14.84□□□□□ -0.03
VEGFA-223ENST00000523125 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
VEGFA-223ENST00000523125 COG2Q14746 738 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 ZMYM1Q5SVZ6 1142 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 MAP3K21Q5TCX8 1036 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 PLEKHH3Q7Z736 793 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 SOCS4Q8WXH5 440 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 LPAR1Q92633 364 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 VCPKMTQ9H867 229 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
VEGFA-223ENST00000523125 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 MINDY4BA8MYZ0 360 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
VEGFA-223ENST00000523125 GNAT2P19087 354 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 RASA1P20936 1047 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 AAMPQ13685 434 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 SPICE1Q8N0Z3 855 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■□ 25.9
VEGFA-223ENST00000523125 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
VEGFA-223ENST00000523125 FOXP2O15409 715 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 PTPREP23469 700 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 PDE1AP54750 535 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 CCNA1P78396 465 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 CCL14Q16627 93 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
VEGFA-223ENST00000523125 CCAR1Q8IX12 1150 aaKnown RBP14.81□□□□□ -0.04
VEGFA-223ENST00000523125 IFNL3Q8IZI9 196 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 RPTORQ8N122 1335 aa14.81□□□□□ -0.04
VEGFA-223ENST00000523125 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 WDR46O15213 610 aaKnown RBP14.8□□□□□ -0.04
VEGFA-223ENST00000523125 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-223ENST00000523125 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
VEGFA-223ENST00000523125 APPP05067 770 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 DSG3P32926 999 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 RGS2P41220 211 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 MAP2K5Q13163 448 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
VEGFA-223ENST00000523125 MOV10L1Q9BXT6 1211 aaKnown RBP14.8□□□□□ -0.04
VEGFA-223ENST00000523125 HMX1Q9NP08 348 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-223ENST00000523125 IGKV6D-41A0A0C4DH26 115 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 SLC34A2O95436 690 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 IGHDP01880 384 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
VEGFA-223ENST00000523125 CAPN2P17655 700 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 TDO2P48775 406 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-223ENST00000523125 GRB14Q14449 540 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 TRMT44Q8IYL2 757 aaKnown RBP14.79□□□□□ -0.04
VEGFA-223ENST00000523125 EXOC6Q8TAG9 804 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 ATG4CQ96DT6 458 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 APBA2Q99767 749 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 SPATC1LQ9H0A9 340 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 ADAMTS5Q9UNA0 930 aa14.79□□□□□ -0.04
VEGFA-223ENST00000523125 H0YGN5 161 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 FLOT1O75955 427 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 IGHA2P01877 340 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 HOXC6P09630 235 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-223ENST00000523125 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-223ENST00000523125 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 MB21D1Q8N884 522 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 FBXO28Q9NVF7 368 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
VEGFA-223ENST00000523125 ZBTB47Q9UFB7 747 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-223ENST00000523125 PRDM1O75626 825 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 NPLOC4Q8TAT6 608 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 DIS3LQ8TF46 1054 aaKnown RBP14.77□□□□□ -0.05
VEGFA-223ENST00000523125 PAWRQ96IZ0 340 aaKnown RBP14.77□□□□□ -0.05
VEGFA-223ENST00000523125 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-223ENST00000523125 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.05
VEGFA-223ENST00000523125 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
VEGFA-223ENST00000523125 RANBP2P49792 3224 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms