RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 MAST2Q6P0Q8 1798 aa8.07□□□□□ -1.12
CSMD1-211ENST00000523062 MAGEB6P1A0A0J9YX57 407 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 KLRG2A4D1S0 409 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 PRC1O43663 620 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 BBOX1O75936 387 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 F13A1P00488 732 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 BCRP11274 1271 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 MCM5P33992 734 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 CTSOP43234 321 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 TDO2P48775 406 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 CHAF1AQ13111 956 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 STK3Q13188 491 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 FOXD4L5Q5VV16 416 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 SPTY2D1Q68D10 685 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 NAA16Q6N069 864 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 RSBN1LQ6PCB5 846 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 SH3BP5LQ7L8J4 393 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 COL23A1Q86Y22 540 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 TBC1D10CQ8IV04 446 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 LCORLQ8N3X6 602 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 FOXD4L4Q8WXT5 416 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 ZNF274Q96GC6 653 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 LRRC2Q9BYS8 371 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 EPB41L4AQ9HCS5 686 aaPredicted RBP8.06□□□□□ -1.12
CSMD1-211ENST00000523062 GGA1Q9UJY5 639 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 KIF3AQ9Y496 699 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 SLC4A4Q9Y6R1 1079 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 LRRC37AA6NMS7 1700 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 NRXN2Q9P2S2 1712 aa8.06□□□□□ -1.12
CSMD1-211ENST00000523062 SALL1Q9NSC2 1324 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 CACNA1SQ13698 1873 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 VPS37CA5D8V6 355 aaPredicted RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 WTIPA6NIX2 430 aaPredicted RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 GSG1L2A8MUP6 293 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 UFL1O94874 794 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 EVCP57679 992 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 GPSM2P81274 684 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 KLHL40Q2TBA0 621 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 IFNL3Q8IZI9 196 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 MIGA1Q8NAN2 632 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 TDRD7Q8NHU6 1098 aaKnown RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 WDR66Q8TBY9 1149 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 NSUN4Q96CB9 384 aaKnown RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 BRIP1Q9BX63 1249 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 KRT23Q9C075 422 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 RNF41Q9H4P4 317 aaPredicted RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 CNNM2Q9H8M5 875 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 MTMR6Q9Y217 621 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 DDX49Q9Y6V7 483 aaKnown RBP8.05□□□□□ -1.12
CSMD1-211ENST00000523062 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
CSMD1-211ENST00000523062 GOLGA8BA8MQT2 603 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 SH2B2O14492 632 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 PRKAB2O43741 272 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 MBD3O95983 291 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 MMP10P09238 476 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 FURINP09958 794 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 NPR1P16066 1061 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 PDIA3P30101 505 aaKnown RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 ANTXR2P58335 489 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 MECOMQ03112 1051 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 SCRN1Q12765 414 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 CSPP1Q1MSJ5 1256 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 AKNAD1Q5T1N1 836 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 GIMAP6Q6P9H5 292 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 POTEAQ6S8J7 498 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 ADGRA1Q86SQ6 560 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 FAM184AQ8NB25 1140 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 SMARCC2Q8TAQ2 1214 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 STAG1Q8WVM7 1258 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 RIOK1Q9BRS2 568 aaKnown RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 CRNKL1Q9BZJ0 848 aaKnown RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 LMBRD1Q9NUN5 540 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 RGS17Q9UGC6 210 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 NAP1L2Q9ULW6 460 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-211ENST00000523062 PARP3Q9Y6F1 533 aa8.04□□□□□ -1.12
CSMD1-211ENST00000523062 NEDD4P46934 1319 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 ANKRD31Q8N7Z5 1873 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 KLF18A0A0U1RQI7 1052 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 PTPDC1A2A3K4 754 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 DHX16O60231 1041 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 JAK2O60674 1132 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 PRPF40AO75400 957 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 PRDX5P30044 214 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 PDE6BP35913 854 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 GSTO1P78417 241 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 PPARAQ07869 468 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 MFSD6Q6ZSS7 791 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 CHST3Q7LGC8 479 aa8.03□□□□□ -1.12
CSMD1-211ENST00000523062 ALYREFQ86V81 257 aaKnown RBP8.03□□□□□ -1.12
CSMD1-211ENST00000523062 SP8Q8IXZ3 490 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms