RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 AKR1B1P15121 316 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 PTPREP23469 700 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 CYP2C19P33261 490 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 LHX8Q68G74 356 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 RPAP2Q8IXW5 612 aaPredicted RBP18.65■□□□□ 0.58
MRPS28-209ENST00000522987 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
MRPS28-209ENST00000522987 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 SMCHD1A6NHR9 2005 aa18.64■□□□□ 0.58
MRPS28-209ENST00000522987 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.57
MRPS28-209ENST00000522987 MS4A1P11836 297 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 CAPN2P17655 700 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 ADD2P35612 726 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.57
MRPS28-209ENST00000522987 PLS1Q14651 629 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 LRRC26Q2I0M4 334 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 C20orf194Q5TEA3 1177 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 MFSD14CQ5VZR4 134 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 GDF15Q99988 308 aa18.64■□□□□ 0.57
MRPS28-209ENST00000522987 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
MRPS28-209ENST00000522987 ATP2B2Q01814 1243 aa18.63■□□□□ 0.57
MRPS28-209ENST00000522987 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
MRPS28-209ENST00000522987 STK11IPQ8N1F8 1099 aa18.63■□□□□ 0.57
MRPS28-209ENST00000522987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
MRPS28-209ENST00000522987 MOV10L1Q9BXT6 1211 aaKnown RBP18.63■□□□□ 0.57
MRPS28-209ENST00000522987 RAB11FIP3O75154 756 aa18.62■□□□□ 0.57
MRPS28-209ENST00000522987 TRPV1Q8NER1 839 aa18.62■□□□□ 0.57
MRPS28-209ENST00000522987 MYH4Q9Y623 1939 aa18.62■□□□□ 0.57
MRPS28-209ENST00000522987 ZNF236Q9UL36 1845 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 RAD21O60216 631 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
MRPS28-209ENST00000522987 ATN1P54259 1190 aaPredicted RBP18.61■□□□□ 0.57
MRPS28-209ENST00000522987 GRB14Q14449 540 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 COG2Q14746 738 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
MRPS28-209ENST00000522987 LBX2Q6XYB7 198 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 DPP9Q86TI2 863 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 SENP6Q9GZR1 1112 aaPredicted RBP18.61■□□□□ 0.57
MRPS28-209ENST00000522987 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
MRPS28-209ENST00000522987 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 USP17L21D6R901 530 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 FLOT1O75955 427 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 COL6A1P12109 1028 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 ATP5JP18859 108 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 ERCC3P19447 782 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 ADORA2AP29274 412 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 MDM2Q00987 491 aaPredicted RBP18.6■□□□□ 0.57
MRPS28-209ENST00000522987 ICA1Q05084 483 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 SIAH1Q8IUQ4 282 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 HAUS7Q99871 368 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 UBE2OQ9C0C9 1292 aaKnown RBP18.6■□□□□ 0.57
MRPS28-209ENST00000522987 SPATC1LQ9H0A9 340 aa18.6■□□□□ 0.57
MRPS28-209ENST00000522987 A0A1W2PPC1 479 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 CDK8P49336 464 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 Q7L0L9 218 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
MRPS28-209ENST00000522987 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 SWAP70Q9UH65 585 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 DDX20Q9UHI6 824 aaKnown RBP18.59■□□□□ 0.57
MRPS28-209ENST00000522987 SLC4A4Q9Y6R1 1079 aa18.59■□□□□ 0.57
MRPS28-209ENST00000522987 COBLO75128 1261 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.56
MRPS28-209ENST00000522987 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
MRPS28-209ENST00000522987 FBXO28Q9NVF7 368 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 HOXC10Q9NYD6 342 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
MRPS28-209ENST00000522987 DSG3P32926 999 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 BMP8BP34820 402 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 C12orf60Q5U649 245 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 VCPKMTQ9H867 229 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 ATP8A2Q9NTI2 1148 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 LTBP2Q14767 1821 aa18.57■□□□□ 0.56
MRPS28-209ENST00000522987 GREB1LQ9C091 1923 aaPredicted RBP18.57■□□□□ 0.56
MRPS28-209ENST00000522987 MCM3APO60318 1980 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 HOXC6P09630 235 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 CYBAP13498 195 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 EEF2P13639 858 aaKnown RBP18.56■□□□□ 0.56
MRPS28-209ENST00000522987 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 TMX2Q9Y320 296 aa18.56■□□□□ 0.56
MRPS28-209ENST00000522987 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
MRPS28-209ENST00000522987 TDHQ8IZJ6 230 aa18.55■□□□□ 0.56
MRPS28-209ENST00000522987 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
MRPS28-209ENST00000522987 TMEM132BQ14DG7 1078 aa18.54■□□□□ 0.56
MRPS28-209ENST00000522987 UBE3CQ15386 1083 aa18.54■□□□□ 0.56
MRPS28-209ENST00000522987 LPAR1Q92633 364 aa18.54■□□□□ 0.56
MRPS28-209ENST00000522987 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
MRPS28-209ENST00000522987 SH2D4AQ9H788 454 aa18.54■□□□□ 0.56
MRPS28-209ENST00000522987 ATP11BQ9Y2G3 1177 aa18.54■□□□□ 0.56
MRPS28-209ENST00000522987 WDR46O15213 610 aaKnown RBP18.53■□□□□ 0.56
MRPS28-209ENST00000522987 PGK2P07205 417 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 SLC4A3P48751 1232 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 RTP1P59025 263 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 FAM83BQ5T0W9 1011 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms