RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ZNF654Q8IZM8 581 aa14.46□□□□□ -0.09
PABPC1-219ENST00000522387 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.09
PABPC1-219ENST00000522387 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.09
PABPC1-219ENST00000522387 IGKV6D-41A0A0C4DH26 115 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 HSP90AA1P07900 732 aaKnown RBP14.46□□□□□ -0.1
PABPC1-219ENST00000522387 ADD1P35611 737 aaKnown RBP14.46□□□□□ -0.1
PABPC1-219ENST00000522387 MTMR2Q13614 643 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 DGKHQ86XP1 1220 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 C2orf69Q8N8R5 385 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 SMC1BQ8NDV3 1235 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 SNCAIPQ9Y6H5 919 aa14.46□□□□□ -0.1
PABPC1-219ENST00000522387 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
PABPC1-219ENST00000522387 ZBTB43O43298 467 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 LIFRP42702 1097 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 SCRN1Q12765 414 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 ANKRD1Q15327 319 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 KIAA1755Q5JYT7 1200 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 L1TD1Q5T7N2 865 aaKnown RBP14.45□□□□□ -0.1
PABPC1-219ENST00000522387 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 ANKRD13AQ8IZ07 590 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 AGXT2Q9BYV1 514 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 MYH4Q9Y623 1939 aa14.45□□□□□ -0.1
PABPC1-219ENST00000522387 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 USP17L5A8MUK1 530 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 CDC27P30260 824 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.18e-11■■■□□ 16.6
PABPC1-219ENST00000522387 HUNKP57058 714 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 STAG2Q8N3U4 1231 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 HPS5Q9UPZ3 1129 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 IRF6O14896 467 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 TROAPQ12815 778 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 SGMS1Q86VZ5 419 aa14.44□□□□□ -0.1
PABPC1-219ENST00000522387 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 F5H6K3 240 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 TOP1P11387 765 aaKnown RBP14.43□□□□□ -0.1
PABPC1-219ENST00000522387 HMGCS2P54868 508 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 HTRA3P83110 453 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 KLRC3Q07444 240 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 ST3GAL1Q11201 340 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 OPTNQ96CV9 577 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 SLC10A4Q96EP9 437 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 ABT1Q9ULW3 272 aaKnown RBP14.43□□□□□ -0.1
PABPC1-219ENST00000522387 WDR19Q8NEZ3 1342 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 SLC16A2P36021 539 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-219ENST00000522387 TMTC2Q8N394 836 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 PHKBQ93100 1093 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 SNX21Q969T3 373 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 DDX11Q96FC9 970 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 ARHGEF10LQ9HCE6 1279 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 PLIN4Q96Q06 1357 aa14.43□□□□□ -0.1
PABPC1-219ENST00000522387 PLEKHA8P1O95397 391 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 FOSBP53539 338 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 CCDC96Q2M329 555 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 NBPF11Q86T75 865 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 FANCBQ8NB91 859 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 VAT1LQ9HCJ6 419 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 NYAP2Q9P242 653 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 USP17L10C9JJH3 530 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 MCM4P33991 863 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 IKQ13123 557 aaPredicted RBP14.42□□□□□ -0.1
PABPC1-219ENST00000522387 TTBK2Q6IQ55 1244 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 ZNF280CQ8ND82 737 aa14.42□□□□□ -0.1
PABPC1-219ENST00000522387 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
PABPC1-219ENST00000522387 JAK2O60674 1132 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 NDUFB10O96000 172 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 PDHBP11177 359 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 SLC1A4P43007 532 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 SLFN13Q68D06 897 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 ZNF274Q96GC6 653 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-219ENST00000522387 ALDH8A1Q9H2A2 487 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-219ENST00000522387 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 PASKQ96RG2 1323 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 CPLX1O14810 134 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 GJA5P36382 358 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 SNAP25P60880 206 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 RTN1Q16799 776 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 FAM83BQ5T0W9 1011 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 GTF3C6Q969F1 213 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
PABPC1-219ENST00000522387 TMX2Q9Y320 296 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 DOCK1Q14185 1865 aa14.41□□□□□ -0.1
PABPC1-219ENST00000522387 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
PABPC1-219ENST00000522387 MCM2P49736 904 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 ZNF157P51786 506 aaPredicted RBP14.4□□□□□ -0.1
PABPC1-219ENST00000522387 CCDC178Q5BJE1 867 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 LDLRAD1Q5T700 205 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 SAPCD2Q86UD0 394 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 FBXL16Q8N461 479 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 CTCFLQ8NI51 663 aaPredicted RBP14.4□□□□□ -0.1
PABPC1-219ENST00000522387 MAD2L2Q9UI95 211 aa14.4□□□□□ -0.1
PABPC1-219ENST00000522387 AFG3L2Q9Y4W6 797 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms