RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 YTHDC1Q96MU7 727 aaKnown RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 STRBPQ96SI9 672 aaKnown RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 APBA2Q99767 749 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 HTATIP2Q9BUP3 242 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 GPAA1O43292 621 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 XRCC5P13010 732 aaKnown RBP12.87□□□□□ -0.35
PVT1-209ENST00000520913 ZKSCAN1P17029 563 aaPredicted RBP12.87□□□□□ -0.35
PVT1-209ENST00000520913 GNAT2P19087 354 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 MX1P20591 662 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 CYP2B6P20813 491 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 RGS2P41220 211 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 Q3C1V9 767 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 CLEC10AQ8IUN9 316 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 OSBP2Q969R2 916 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 HMX1Q9NP08 348 aaPredicted RBP12.87□□□□□ -0.35
PVT1-209ENST00000520913 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
PVT1-209ENST00000520913 GSG1L2A8MUP6 293 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 WDR46O15213 610 aaKnown RBP12.86□□□□□ -0.35
PVT1-209ENST00000520913 TDO2P48775 406 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 MORN1Q5T089 497 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 USP6NLQ92738 828 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
PVT1-209ENST00000520913 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
PVT1-209ENST00000520913 M0R2C6 588 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
PVT1-209ENST00000520913 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
PVT1-209ENST00000520913 TRIM32Q13049 653 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 AAMPQ13685 434 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 COG2Q14746 738 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 OTUD7AQ8TE49 926 aaPredicted RBP12.85□□□□□ -0.35
PVT1-209ENST00000520913 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
PVT1-209ENST00000520913 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 FLOT1O75955 427 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 EEF2P13639 858 aaKnown RBP12.84□□□□□ -0.35
PVT1-209ENST00000520913 ATP2B2Q01814 1243 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
PVT1-209ENST00000520913 GRB14Q14449 540 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 DPF3Q92784 378 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
PVT1-209ENST00000520913 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 APPP05067 770 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 RASA1P20936 1047 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 PTPREP23469 700 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 DSG3P32926 999 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 CCL14Q16627 93 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 SPATC1LQ9H0A9 340 aa12.83□□□□□ -0.36
PVT1-209ENST00000520913 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.36
PVT1-209ENST00000520913 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
PVT1-209ENST00000520913 HOXC6P09630 235 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 CACNB2Q08289 660 aaPredicted RBP12.82□□□□□ -0.36
PVT1-209ENST00000520913 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 NECAB2Q7Z6G3 386 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 IFNL3Q8IZI9 196 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 SEC62Q99442 399 aaKnown RBP12.82□□□□□ -0.36
PVT1-209ENST00000520913 MOV10L1Q9BXT6 1211 aaKnown RBP12.82□□□□□ -0.36
PVT1-209ENST00000520913 NAPBQ9H115 298 aa12.82□□□□□ -0.36
PVT1-209ENST00000520913 H0YGN5 161 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 PLS1Q14651 629 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 HABP4Q5JVS0 413 aaKnown RBP12.81□□□□□ -0.36
PVT1-209ENST00000520913 MFSD14CQ5VZR4 134 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 PAWRQ96IZ0 340 aaKnown RBP12.81□□□□□ -0.36
PVT1-209ENST00000520913 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
PVT1-209ENST00000520913 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 NR2E3Q9Y5X4 410 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 MCM3APO60318 1980 aa12.81□□□□□ -0.36
PVT1-209ENST00000520913 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 STRNO43815 780 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 RAD21O60216 631 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms