RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 FLT3LGP49771 235 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 MFAP1P55081 439 aaKnown RBP16.85■□□□□ 0.29
VEGFA-221ENST00000520265 MLLT1Q03111 559 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-221ENST00000520265 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 HIP1O00291 1037 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 FLOT1O75955 427 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 ERVK-24P63145 666 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 FAM47AQ5JRC9 791 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 RRP12Q5JTH9 1297 aaKnown RBP16.84■□□□□ 0.29
VEGFA-221ENST00000520265 CATSPERGQ6ZRH7 1159 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-221ENST00000520265 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 TXNRD2Q9NNW7 524 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 TMX2Q9Y320 296 aa16.84■□□□□ 0.29
VEGFA-221ENST00000520265 TSPY2A6NKD2 308 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 RANBP6O60518 1105 aaKnown RBP16.83■□□□□ 0.28
VEGFA-221ENST00000520265 NEFLP07196 543 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 HAND2P61296 217 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 PLS1Q14651 629 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 LPAR1Q92633 364 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 MORF4L1Q9UBU8 362 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 CLIP2Q9UDT6 1046 aa16.83■□□□□ 0.28
VEGFA-221ENST00000520265 ADCY3O60266 1144 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 ELNP15502 786 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 UBXN2AP68543 259 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 CCNA1P78396 465 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 TFAP4Q01664 338 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
VEGFA-221ENST00000520265 SLAIN1Q8ND83 568 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 ZNF333Q96JL9 665 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 RBPJLQ9UBG7 517 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
VEGFA-221ENST00000520265 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 SPDYE16A6NNV3 312 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-221ENST00000520265 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
VEGFA-221ENST00000520265 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
VEGFA-221ENST00000520265 MAPK4P31152 587 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 COG2Q14746 738 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 SIAH1Q8IUQ4 282 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 CEP95Q96GE4 821 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
VEGFA-221ENST00000520265 HTTP42858 3142 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 FOXP2O15409 715 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
VEGFA-221ENST00000520265 CYP2B6P20813 491 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 NUP88Q99567 741 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-221ENST00000520265 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
VEGFA-221ENST00000520265 PORCNQ9H237 461 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 HOXC10Q9NYD6 342 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-221ENST00000520265 IVNS1ABPQ9Y6Y0 642 aa16.8■□□□□ 0.28
VEGFA-221ENST00000520265 TTLL1O95922 423 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 FGAP02671 866 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 INHAP05111 366 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 Q3C1V9 767 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 GPR142Q7Z601 462 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 TICAM2Q86XR7 235 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 SOCS4Q8WXH5 440 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
VEGFA-221ENST00000520265 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-221ENST00000520265 MTFR1Q15390 333 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 ALX1Q15699 326 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 RNF208Q9H0X6 261 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
VEGFA-221ENST00000520265 CENPFP49454 3210 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 F5H6K3 240 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 ZNF213O14771 459 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 CNMDO75829 334 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 NDUFB10O96000 172 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 CCL5P13501 91 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 EN2P19622 333 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-221ENST00000520265 DSG3P32926 999 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 KLRC3Q07444 240 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 IRF5Q13568 498 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-221ENST00000520265 NCAPG2Q86XI2 1143 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
VEGFA-221ENST00000520265 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-221ENST00000520265 ZKSCAN1P17029 563 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-221ENST00000520265 RGS2P41220 211 aa16.76■□□□□ 0.27
VEGFA-221ENST00000520265 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
VEGFA-221ENST00000520265 SLFN13Q68D06 897 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms