RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 TRPM4Q8TD43 1214 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 ANKRD24Q8TF21 1146 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 DDX17Q92841 729 aaKnown RBP5.57□□□□□ -1.52
PABPC1-212ENST00000519622 KAZALD1Q96I82 304 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 DMRTB1Q96MA1 342 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 ASB16Q96NS5 453 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 USP26Q9BXU7 913 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 TNS2Q63HR2 1409 aa5.57□□□□□ -1.52
PABPC1-212ENST00000519622 COL16A1Q07092 1604 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 UTYO14607 1347 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 AOX1Q06278 1338 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 AFDNP55196 1824 aaKnown RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 ANXA1P04083 346 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 GNAI2P04899 355 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 HOXD8P13378 290 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 CES1P23141 567 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 MCM4P33991 863 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 BECN1Q14457 450 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 GRIK5Q16478 980 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 PERM1Q5SV97 790 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 TMCO4Q5TGY1 634 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 CCDC30Q5VVM6 783 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 ZNF530Q6P9A1 599 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 CLEC17AQ6ZS10 378 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 KRT28Q7Z3Y7 464 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 PI4K2BQ8TCG2 481 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 RTF1Q92541 710 aaKnown RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 CHPF2Q9P2E5 772 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 EXOC6BQ9Y2D4 811 aa5.56□□□□□ -1.52
PABPC1-212ENST00000519622 LRRFIP2Q9Y608 721 aaKnown RBP5.56□□□□□ -1.52
PABPC1-212ENST00000519622 LOC102724428A0A0B4J2F2 783 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 EIF1AYO14602 144 aaKnown RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 TREHO43280 583 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 DYRK3O43781 588 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 KIF4AO95239 1232 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 NBPF7P0C2Y1 421 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 SIK1P57059 783 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 ATP11AP98196 1134 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 HYAL2Q12891 473 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 DSC3Q14574 896 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 RAB3GAP1Q15042 981 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 DNAJC14Q6Y2X3 702 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 NCAPG2Q86XI2 1143 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 ZSCAN29Q8IWY8 852 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 ALKBH8Q96BT7 664 aaKnown RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 LPIN3Q9BQK8 851 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 C19orf44Q9H6X5 657 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 ZFYVE28Q9HCC9 887 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 LATS2Q9NRM7 1088 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 CHMP5Q9NZZ3 219 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 PALD1Q9ULE6 856 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 COL5A2P05997 1499 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-212ENST00000519622 COL15A1P39059 1388 aa5.55□□□□□ -1.52
PABPC1-212ENST00000519622 SPATA31A3Q5VYP0 1347 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 NPHP3Q7Z494 1330 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ANKRD33BA6NCL7 494 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 CYP27B1O15528 508 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 TRPA1O75762 1119 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 GHRHP01286 108 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 GNAI3P08754 354 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ELNP15502 786 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 MAPK8P45983 427 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 FMR1Q06787 632 aaKnown RBP eCLIP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ADGRE1Q14246 886 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 MBTPS1Q14703 1052 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 PCSK7Q16549 785 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 SLC4A10Q6U841 1118 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 MPRIPQ6WCQ1 1025 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 LENG1Q96BZ8 264 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 CSRNP1Q96S65 589 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 SETDB2Q96T68 719 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 UPF2Q9HAU5 1272 aaKnown RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 SALL4Q9UJQ4 1053 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 COL22A1Q8NFW1 1626 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 DDX60Q8IY21 1712 aaKnown RBP5.54□□□□□ -1.52
PABPC1-212ENST00000519622 JCADQ9P266 1359 aa5.54□□□□□ -1.52
PABPC1-212ENST00000519622 RREB1Q92766 1687 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 LRP5O75197 1615 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 CICQ96RK0 1608 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PNMA6FA0A0J9YX94 578 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PI4KAP2A4QPH2 592 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 C9orf172C9J069 976 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
PABPC1-212ENST00000519622 IGKV5-2P06315 115 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 P4HBP07237 508 aaKnown RBP5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PHKG2P15735 406 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 CHMLP26374 656 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 AMOTQ4VCS5 1084 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PLEKHO1Q53GL0 409 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PPP1R42Q7Z4L9 355 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 NPAS4Q8IUM7 802 aa5.53□□□□□ -1.52
PABPC1-212ENST00000519622 FMR1NBQ8N0W7 255 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-212ENST00000519622 PI4KAP1Q8N8J0 262 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms