RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 PPARAQ07869 468 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 PABPC4Q13310 644 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 GSE1Q14687 1217 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 EMILIN3Q9NT22 766 aa12.91□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 RAD21O60216 631 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 RASA1P20936 1047 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 OSBPP22059 807 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 KIF22Q14807 665 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 C17orf99Q6UX52 265 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 OTOP1Q7RTM1 612 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 ASCC2Q9H1I8 757 aaPredicted RBP12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
CTD-2270F17.1-201ENST00000518387 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HIP1O00291 1037 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 SLC3A2P08195 630 aaKnown RBP12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP14P54578 494 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 MFAP1P55081 439 aaKnown RBP12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HAND2P61296 217 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TAOK2Q9UL54 1235 aa12.89□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PEX10O60683 326 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 BCRP11274 1271 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 VCAM1P19320 739 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PDE4BQ07343 736 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ZNF444Q8N0Y2 327 aaPredicted RBP12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ZNF287Q9HBT7 754 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RLFQ13129 1914 aa12.88□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FGAP02671 866 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CTGFP29279 349 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PSMC4P43686 418 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HERVK_113P62684 666 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FBXO46Q6PJ61 603 aaPredicted RBP12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TANGO6Q9C0B7 1094 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 IL25Q9H293 177 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 A0A0G2JMZ2 1700 aa12.87□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HTTP42858 3142 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ARHGEF6Q15052 776 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PKN2Q16513 984 aaKnown RBP12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 KIAA1755Q5JYT7 1200 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PCDH10Q9P2E7 1040 aa12.86□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 GCLCP48506 637 aaPredicted RBP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FCGRTP55899 365 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 TFAP4Q01664 338 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 ALX1Q15699 326 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 FAM110CQ1W6H9 321 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
CTD-2270F17.1-201ENST00000518387 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms