RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 WDR66Q8TBY9 1149 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 GGA3Q9NZ52 723 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 DENND2AQ9ULE3 1009 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 TTF2Q9UNY4 1162 aaKnown RBP7.49□□□□□ -1.21
MRPS28-203ENST00000518371 EXOC6BQ9Y2D4 811 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 PASKQ96RG2 1323 aa7.49□□□□□ -1.21
MRPS28-203ENST00000518371 WNT10BO00744 389 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 MYO1BO43795 1136 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 CELF2O95319 508 aaKnown RBP7.48□□□□□ -1.21
MRPS28-203ENST00000518371 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
MRPS28-203ENST00000518371 TNNI3KQ59H18 835 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 CCDC158Q5M9N0 1113 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 GPR108Q9NPR9 543 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 ABT1Q9ULW3 272 aaKnown RBP7.48□□□□□ -1.21
MRPS28-203ENST00000518371 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
MRPS28-203ENST00000518371 FPGT-TNNI3KV9GXZ4 949 aa7.48□□□□□ -1.21
MRPS28-203ENST00000518371 ASTN2O75129 1339 aaPredicted RBP7.48□□□□□ -1.21
MRPS28-203ENST00000518371 ADM5C9JUS6 153 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 LDHBP07195 334 aaKnown RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 UQCRFS1P1P0C7P4 283 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 BCRP11274 1271 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 CRKP46108 304 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SCTRP47872 440 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 GRIK5Q16478 980 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 TTC39AQ5SRH9 613 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SPTY2D1Q68D10 685 aaPredicted RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 DLK2Q6UY11 383 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SIRT2Q8IXJ6 389 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 TEKT1Q969V4 418 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 PRMT6Q96LA8 375 aaPredicted RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 CRBNQ96SW2 442 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 DBNDD2Q9BQY9 259 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 CCDC8Q9H0W5 538 aaPredicted RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 IL1RAPL2Q9NP60 686 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SERPINA10Q9UK55 444 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SCAF8Q9UPN6 1271 aaKnown RBP7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SUGT1Q9Y2Z0 365 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 MAST3O60307 1309 aa7.47□□□□□ -1.21
MRPS28-203ENST00000518371 SCN9AQ15858 1988 aa7.46□□□□□ -1.21
MRPS28-203ENST00000518371 ZNF609O15014 1411 aa7.46□□□□□ -1.21
MRPS28-203ENST00000518371 CLRN2A0PK11 232 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 HDLBPQ00341 1268 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 RASGRF1Q13972 1273 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 DEFB115Q30KQ5 88 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 PRAMEF18Q5VWM3 479 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 CST9Q5W186 159 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 ERICH6Q7L0X2 663 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 AACSQ86V21 672 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 APOBEC3FQ8IUX4 373 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 CLASRPQ8N2M8 674 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 ZGPATQ8N5A5 531 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 C2orf69Q8N8R5 385 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 KIF1BPQ96EK5 621 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 CDCA5Q96FF9 252 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 MRIQ9BWK5 157 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 CUEDC1Q9NWM3 386 aaPredicted RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 HMG20BQ9P0W2 317 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 SUPT16HQ9Y5B9 1047 aaKnown RBP7.46□□□□□ -1.22
MRPS28-203ENST00000518371 PCDHAC2Q9Y5I4 1007 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 PITPNM2Q9BZ72 1349 aa7.46□□□□□ -1.22
MRPS28-203ENST00000518371 KRBA1A5PL33 1030 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 IFIT2P09913 472 aaKnown RBP7.45□□□□□ -1.22
MRPS28-203ENST00000518371 RHOQP17081 205 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 NF2P35240 595 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 ERVK-9P63128 1117 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 GRM1Q13255 1194 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 HHIPL2Q6UWX4 724 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 PRICKLE2Q7Z3G6 844 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 DZIP1Q86YF9 867 aaKnown RBP7.45□□□□□ -1.22
MRPS28-203ENST00000518371 DNAJC5GQ8N7S2 189 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 ZBED3Q96IU2 234 aaPredicted RBP7.45□□□□□ -1.22
MRPS28-203ENST00000518371 GBA2Q9HCG7 927 aaPredicted RBP7.45□□□□□ -1.22
MRPS28-203ENST00000518371 TMOD2Q9NZR1 351 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 RAI14Q9P0K7 980 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 LRP2BPQ9P2M1 347 aa7.45□□□□□ -1.22
MRPS28-203ENST00000518371 ZNF70Q9UC06 446 aaPredicted RBP7.45□□□□□ -1.22
MRPS28-203ENST00000518371 A0A1W2PRU2 124 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 TCP10L2B9ZVM9 353 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 LDHCP07864 332 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
MRPS28-203ENST00000518371 PRDX5P30044 214 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 MCAMP43121 646 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 TNNI2P48788 182 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 RNF144AP50876 292 aaPredicted RBP7.44□□□□□ -1.22
MRPS28-203ENST00000518371 HUNKP57058 714 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 TNFAIP1Q13829 316 aa7.44□□□□□ -1.22
MRPS28-203ENST00000518371 PRKG1Q13976 671 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms