RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 LPAR1Q92633 364 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 TXNRD2Q9NNW7 524 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 INCENPQ9NQS7 918 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 RBPJLQ9UBG7 517 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 MORF4L1Q9UBU8 362 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 ZSWIM8A7E2V4 1837 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 TSPY3P0CV98 308 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 TSPY8P0CW00 308 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 TFAP4Q01664 338 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
FAM49B-208ENST00000518344 NBPF11Q86T75 865 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 GTF3C2Q8WUA4 911 aaPredicted RBP22.18■■□□□ 1.14
FAM49B-208ENST00000518344 COA7Q96BR5 231 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 GOPCQ9HD26 462 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 GABRQQ9UN88 632 aa22.18■■□□□ 1.14
FAM49B-208ENST00000518344 Q3C1V9 767 aa22.17■■□□□ 1.14
FAM49B-208ENST00000518344 CCAR1Q8IX12 1150 aaKnown RBP22.17■■□□□ 1.14
FAM49B-208ENST00000518344 SH3TC2Q8TF17 1288 aa22.17■■□□□ 1.14
FAM49B-208ENST00000518344 TOMM22Q9NS69 142 aa22.17■■□□□ 1.14
FAM49B-208ENST00000518344 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
FAM49B-208ENST00000518344 NEFLP07196 543 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 FLT3LGP49771 235 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 ERVK-9P63128 1117 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 ERVK-24P63145 666 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 COG2Q14746 738 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 POTEEQ6S8J3 1075 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 SAMD1Q6SPF0 538 aaPredicted RBP22.16■■□□□ 1.14
FAM49B-208ENST00000518344 CEP95Q96GE4 821 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 HOXC10Q9NYD6 342 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 NYAP2Q9P242 653 aa22.16■■□□□ 1.14
FAM49B-208ENST00000518344 IGKV6D-41A0A0C4DH26 115 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 WDR46O15213 610 aaKnown RBP22.15■■□□□ 1.14
FAM49B-208ENST00000518344 RANBP6O60518 1105 aaKnown RBP22.15■■□□□ 1.14
FAM49B-208ENST00000518344 MYCP01106 439 aaPredicted RBP22.15■■□□□ 1.14
FAM49B-208ENST00000518344 HAND2P61296 217 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 NEDD1Q8NHV4 660 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 ARMC5Q96C12 935 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 MTMR4Q9NYA4 1195 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.15■■□□□ 1.14
FAM49B-208ENST00000518344 RABGAP1Q9Y3P9 1069 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 MYH8P13535 1937 aa22.15■■□□□ 1.14
FAM49B-208ENST00000518344 TSPY2A6NKD2 308 aa22.14■■□□□ 1.13
FAM49B-208ENST00000518344 SPDYE16A6NNV3 312 aaPredicted RBP22.14■■□□□ 1.13
FAM49B-208ENST00000518344 CNMDO75829 334 aa22.14■■□□□ 1.13
FAM49B-208ENST00000518344 FLOT1O75955 427 aa22.14■■□□□ 1.13
FAM49B-208ENST00000518344 RRP12Q5JTH9 1297 aaKnown RBP22.14■■□□□ 1.13
FAM49B-208ENST00000518344 CCDC136Q96JN2 1154 aa22.14■■□□□ 1.13
FAM49B-208ENST00000518344 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.13
FAM49B-208ENST00000518344 TACC3Q9Y6A5 838 aa22.14■■□□□ 1.13
FAM49B-208ENST00000518344 ZMYM6O95789 1325 aa22.13■■□□□ 1.13
FAM49B-208ENST00000518344 TTLL1O95922 423 aa22.13■■□□□ 1.13
FAM49B-208ENST00000518344 GRK4P32298 578 aa22.13■■□□□ 1.13
FAM49B-208ENST00000518344 BTBD7Q9P203 1132 aa22.13■■□□□ 1.13
FAM49B-208ENST00000518344 BIN2Q9UBW5 565 aaPredicted RBP22.13■■□□□ 1.13
FAM49B-208ENST00000518344 F5H6K3 240 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 ZNF213O14771 459 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 KLRC3Q07444 240 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 FAM83BQ5T0W9 1011 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 LBX2Q6XYB7 198 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 SKAP1Q86WV1 359 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 ZNF333Q96JL9 665 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 PORCNQ9H237 461 aa22.12■■□□□ 1.13
FAM49B-208ENST00000518344 ORC4O43929 436 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 ADCY3O60266 1144 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 CHMLP26374 656 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 MAPK4P31152 587 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 DSG3P32926 999 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 CCNA1P78396 465 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 WDR78Q5VTH9 848 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 MFSD6Q6ZSS7 791 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 LRRC47Q8N1G4 583 aaKnown RBP22.11■■□□□ 1.13
FAM49B-208ENST00000518344 RUFY2Q8WXA3 655 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 MKL1Q969V6 931 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 NUP88Q99567 741 aaPredicted RBP22.11■■□□□ 1.13
FAM49B-208ENST00000518344 IL25Q9H293 177 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 PLIN4Q96Q06 1357 aa22.11■■□□□ 1.13
FAM49B-208ENST00000518344 NDUFB10O96000 172 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 FGRP09769 529 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 SLAIN1Q8ND83 568 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 ATG4CQ96DT6 458 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 DSCC1Q9BVC3 393 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 TMEM106CQ9BVX2 250 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 GJD2Q9UKL4 321 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 STX8Q9UNK0 236 aa22.1■■□□□ 1.13
FAM49B-208ENST00000518344 NMT2O60551 498 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 ELNP15502 786 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 IRF5Q13568 498 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 PPP4R3BQ5MIZ7 849 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 AKNAD1Q5T1N1 836 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 GPR142Q7Z601 462 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 PLEKHH3Q7Z736 793 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 TBC1D10CQ8IV04 446 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 IL17RBQ9NRM6 502 aa22.09■■□□□ 1.13
FAM49B-208ENST00000518344 RGS19P49795 217 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 PLS1Q14651 629 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 MB21D1Q8N884 522 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 CHMP4CQ96CF2 233 aa22.08■■□□□ 1.13
FAM49B-208ENST00000518344 NUDT12Q9BQG2 462 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms