RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
SPIDR-205ENST00000518060 CNMDO75829 334 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
SPIDR-205ENST00000518060 TRIM32Q13049 653 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-205ENST00000518060 PLS1Q14651 629 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 TRIB2Q92519 343 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 LPAR1Q92633 364 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
SPIDR-205ENST00000518060 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-205ENST00000518060 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 MYH7P12883 1935 aa12.64□□□□□ -0.39
SPIDR-205ENST00000518060 BAZ2AQ9UIF9 1905 aaKnown RBP12.63□□□□□ -0.39
SPIDR-205ENST00000518060 PRDM1O75626 825 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 SGPL1O95470 568 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
SPIDR-205ENST00000518060 COG2Q14746 738 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 APBA2Q99767 749 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 LNPKQ9C0E8 428 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 NAPBQ9H115 298 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-205ENST00000518060 ZNF287Q9HBT7 754 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 HMX1Q9NP08 348 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-205ENST00000518060 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
SPIDR-205ENST00000518060 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
SPIDR-205ENST00000518060 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
SPIDR-205ENST00000518060 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
SPIDR-205ENST00000518060 SBK1Q52WX2 424 aa12.62□□□□□ -0.39
SPIDR-205ENST00000518060 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
SPIDR-205ENST00000518060 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
SPIDR-205ENST00000518060 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
SPIDR-205ENST00000518060 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-205ENST00000518060 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
SPIDR-205ENST00000518060 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
SPIDR-205ENST00000518060 RASA1P20936 1047 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 AAMPQ13685 434 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 CCL14Q16627 93 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 MORN1Q5T089 497 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 NCAPG2Q86XI2 1143 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-205ENST00000518060 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 SPATC1LQ9H0A9 340 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 BRCA2P51587 3418 aa12.61□□□□□ -0.39
SPIDR-205ENST00000518060 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 XRCC5P13010 732 aaKnown RBP12.6□□□□□ -0.39
SPIDR-205ENST00000518060 PTPREP23469 700 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 DSG3P32926 999 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 PDE1AP54750 535 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 PDE4BQ07343 736 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 MOV10L1Q9BXT6 1211 aaKnown RBP12.6□□□□□ -0.39
SPIDR-205ENST00000518060 MYH8P13535 1937 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 SALL3Q9BXA9 1300 aa12.6□□□□□ -0.39
SPIDR-205ENST00000518060 H0YGN5 161 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 ERCC3P19447 782 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 PPARAQ07869 468 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 CACNB2Q08289 660 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-205ENST00000518060 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
SPIDR-205ENST00000518060 MB21D1Q8N884 522 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 DIS3LQ8TF46 1054 aaKnown RBP12.59□□□□□ -0.39
SPIDR-205ENST00000518060 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-205ENST00000518060 FBXO28Q9NVF7 368 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
SPIDR-205ENST00000518060 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-205ENST00000518060 MKI67P46013 3256 aaKnown RBP12.58□□□□□ -0.4
SPIDR-205ENST00000518060 ADORA2AP29274 412 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 CNGA1P29973 690 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-205ENST00000518060 GRB14Q14449 540 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 FAM47AQ5JRC9 791 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 USP6NLQ92738 828 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
SPIDR-205ENST00000518060 PAWRQ96IZ0 340 aaKnown RBP12.58□□□□□ -0.4
SPIDR-205ENST00000518060 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPIDR-205ENST00000518060 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms