RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 USP17L13C9JLJ4 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L11C9JVI0 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L18D6R9N7 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L22D6RA61 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L17D6RBQ6 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L19D6RCP7 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L20D6RJB6 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 CHGBP05060 677 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 GUCY1A2P33402 732 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 HERVK_113P62684 666 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L24Q0WX57 530 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 AMOTL1Q8IY63 956 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 ACER1Q8TDN7 264 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 USP17L21D6R901 530 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 MPHOSPH10O00566 681 aaKnown RBP12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 EVX2Q03828 476 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 SEPT2Q15019 361 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 DYNLL2Q96FJ2 89 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 CRBNQ96SW2 442 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 REV3LO60673 3130 aa12.7□□□□□ -0.38
PDGFRB-203ENST00000517660 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 PTPRFP10586 1907 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 ERC2O15083 957 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 TSHZ3Q63HK5 1081 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 CCDC17Q96LX7 622 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 TXNRD2Q9NNW7 524 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 MYO5AQ9Y4I1 1855 aaKnown RBP12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
PDGFRB-203ENST00000517660 SIPA1L1O43166 1804 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 VCAM1P19320 739 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 CCND3P30281 292 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 CDK8P49336 464 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 Q3C1V9 767 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 CTR9Q6PD62 1173 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 APPBP2Q92624 585 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
PDGFRB-203ENST00000517660 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 PEX10O60683 326 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 AKR1B1P15121 316 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 MAPK4P31152 587 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 ERVK-24P63145 666 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 HDAC1Q13547 482 aaPredicted RBP12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 AAMPQ13685 434 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 GIMAP6Q6P9H5 292 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 C16orf86Q6ZW13 317 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 OSBP2Q969R2 916 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 PAGR1Q9BTK6 254 aa12.67□□□□□ -0.38
PDGFRB-203ENST00000517660 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 GNAT2P19087 354 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 MX1P20591 662 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 CCNA1P78396 465 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 ASB2Q96Q27 587 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 RPAP3Q9H6T3 665 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-203ENST00000517660 FOCADQ5VW36 1801 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 GPAA1O43292 621 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 CNMDO75829 334 aa12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 XRCC5P13010 732 aaKnown RBP12.65□□□□□ -0.38
PDGFRB-203ENST00000517660 CYP2B6P20813 491 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms