RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 BLZF1Q9H2G9 400 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 VIPAS39Q9H9C1 493 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF287Q9HBT7 754 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MAPK8IP1Q9UQF2 711 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 CAPN7Q9Y6W3 813 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 STK36Q9NRP7 1315 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 TSPY2A6NKD2 308 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ZRANB2O95218 330 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 CFAP221Q4G0U5 840 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 TAX1BP1Q86VP1 789 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 CEP57Q86XR8 500 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF654Q8IZM8 581 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 FANCBQ8NB91 859 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 AIFM3Q96NN9 605 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ZHX3Q9H4I2 956 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 ARMT1Q9H993 441 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 GJB4Q9NTQ9 266 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 HYOU1Q9Y4L1 999 aa7.45□□□□□ -1.22
CPNE3-203ENST00000517490 CLTCQ00610 1675 aaKnown RBP7.45□□□□□ -1.22
CPNE3-203ENST00000517490 KIF13AQ9H1H9 1805 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 FDPSP14324 419 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 PHKG2P15735 406 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 LIFRP42702 1097 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 NOP2P46087 812 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 MAP2K1Q02750 393 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ELOA2Q8IYF1 753 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 GRAMD1CQ8IYS0 662 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ANKS4BQ8N8V4 417 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 TC2NQ8N9U0 490 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ZCRB1Q8TBF4 217 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 DYDC1Q8WWB3 177 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 RWDD2AQ9UIY3 292 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 TMEM131LA2VDJ0 1609 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 NDUFA10O95299 355 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ITGA6P23229 1130 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 PUM3Q15397 648 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 STAMQ92783 540 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 IFIH1Q9BYX4 1025 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 RABEP2Q9H5N1 569 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 CEMIPQ8WUJ3 1361 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 TRIM66O15016 1216 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 PDE6AP16499 860 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 EEF1GP26641 437 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 MAGEA1P43355 309 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 NCAPH2Q6IBW4 605 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 RUFY4Q6ZNE9 571 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 IFNL3Q8IZI9 196 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 RETREG2Q8NC44 543 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 LRRC45Q96CN5 670 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 NSRP1Q9H0G5 558 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 STRN4Q9NRL3 753 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 VPS54Q9P1Q0 977 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 A0A1B0GTH6 734 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 ENC1O14682 589 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 EPHB4P54760 987 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 RABL6Q3YEC7 729 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 CPLX4Q7Z7G2 160 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 LMBR1Q8WVP7 490 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 FAM89AQ96GI7 184 aa7.44□□□□□ -1.22
CPNE3-203ENST00000517490 CRNKL1Q9BZJ0 848 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 PUS7LQ9H0K6 701 aaKnown RBP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 AATFQ9NY61 560 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPNE3-203ENST00000517490 TECPR2O15040 1411 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 A0A1B0GUA9 196 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 RPN1P04843 607 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 PDE4DQ08499 809 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 NCAPHQ15003 741 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 CNNM4Q6P4Q7 775 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 TRIM65Q6PJ69 517 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 RSRC2Q7L4I2 434 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 LPIN2Q92539 896 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 PAGE5Q96GU1 130 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 GOPCQ9HD26 462 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.43□□□□□ -1.221e-6■□□□□ 11.1
CPNE3-203ENST00000517490 FAM184BQ9ULE4 1060 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ITSN1Q15811 1721 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 H7C1W4 665 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ADORA1P30542 326 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ADD2P35612 726 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 VSNL1P62760 191 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 KRT31Q15323 416 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ALS2CLQ60I27 953 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 RASGRP2Q7LDG7 609 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 CERS3Q8IU89 383 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 MIGA1Q8NAN2 632 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 RNF26Q9BY78 433 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 ABHD10Q9NUJ1 306 aa7.43□□□□□ -1.22
CPNE3-203ENST00000517490 NPHP4O75161 1426 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-203ENST00000517490 SPATA31D1Q6ZQQ2 1576 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms